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Vmn2r-ps54 Pseudogene Detail
Summary
  • Symbol
    Vmn2r-ps54
  • Name
    vomeronasal 2, receptor, pseudogene 54
  • Synonyms
    1700108E19Rik, 4930562N12Rik, Casr-rs5, Gprc2a-rs5
Location &
Maps
more
  • Sequence Map
    Chr7:41317438-41376617 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 28.25 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1879 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1351350
 pseudogene Chr7:41317403-41376617 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039852
 pseudogene Chr7:41450871-41518927 (+)
A/J MGP_AJ_G0039853
 pseudogene Chr7:41108463-41109966 (+)
AKR/J MGP_AKRJ_G0039780
 pseudogene Chr7:41767769-41831354 (+)
BALB/cJ MGP_BALBcJ_G0039826
 pseudogene Chr7:40763429-40822329 (+)
C3H/HeJ MGP_C3HHeJ_G0039479
 pseudogene Chr7:42375006-42915962 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040400
 pseudogene Chr7:43524415-43597829 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039449
 pseudogene Chr7:44840183-44919901 (+)
DBA/2J MGP_DBA2J_G0039650
 pseudogene Chr7:40398629-40466845 (+)
FVB/NJ MGP_FVBNJ_G0039609
 pseudogene Chr7:40082503-40162350 (+)
LP/J MGP_LPJ_G0039687
 pseudogene Chr7:42503771-42505274 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039605
 pseudogene Chr7:43694994-44323094 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040497
 pseudogene Chr7:41013666-41077423 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0038819
 pseudogene Chr7:41462696-41994199 (+)



Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 75835 NCBI Gene Model | MGI Sequence Detail 59180 C57BL/6J ±  kb
transcript NR_004441 RefSeq | MGI Sequence Detail 2952 C57BL/6  
For the selected sequence
Molecular
Reagents
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  • All nucleic 5
    cDNA 5

    Microarray probesets 3
Other
Accession IDs
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MGI:1101766, MGI:1921542, MGI:1923085
References
more
  • Summaries
    All 16
  • Earliest
    J:29900 Ho C, et al., A mouse model of human familial hypocalciuric hypercalcemia and neonatal severe hyperparathyroidism [see comments]. Nat Genet. 1995 Dec;11(4):389-94
  • Latest
    J:122919 Yu X, et al., Using an advanced intercross line to identify quantitative trait loci controlling immune response during collagen-induced arthritis. Genes Immun. 2007 Jun;8(4):296-301
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory