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Reg3d Gene Detail
Summary
  • Symbol
    Reg3d
  • Name
    regenerating islet-derived 3 delta
  • Synonyms
    INGAP, Ingaprp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1353426
    NCBI Gene: 30053
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:78352857-78355848 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 34.76 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    187 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1353426
 protein coding gene Chr6:78352857-78355848 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030894
 protein coding gene Chr6:79196675-79199666 (-)
A/J MGP_AJ_G0030863
 protein coding gene Chr6:76116111-76119102 (-)
AKR/J MGP_AKRJ_G0030791
 protein coding gene Chr6:78371389-78374380 (-)
BALB/cJ MGP_BALBcJ_G0030873
 protein coding gene Chr6:76189503-76192494 (-)
C3H/HeJ MGP_C3HHeJ_G0030837
 protein coding gene Chr6:105914573-105917564 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031333
 protein coding gene Chr6:81316605-81319596 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028520
 protein coding gene Chr6:74915053-74918041 (-)
CAST/EiJ MGP_CASTEiJ_G0029981
 protein coding gene Chr6:78304760-78307749 (-)
CBA/J MGP_CBAJ_G0030560
 protein coding gene Chr6:84520698-84523689 (-)
DBA/2J MGP_DBA2J_G0030713
 protein coding gene Chr6:75488845-75491836 (-)
FVB/NJ MGP_FVBNJ_G0030666
 protein coding gene Chr6:74756620-74759611 (-)
LP/J MGP_LPJ_G0030792
 protein coding gene Chr6:79107743-79110734 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030702
 protein coding gene Chr6:88522138-88525129 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031357
 protein coding gene Chr6:78200687-78203660 (-)
PWK/PhJ MGP_PWKPhJ_G0029697
 protein coding gene Chr6:74441005-74443978 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029525
 protein coding gene Chr6:77027791-77030781 (-)
WSB/EiJ MGP_WSBEiJ_G0030063
 protein coding gene Chr6:78607117-78610108 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 30053 NCBI Gene Model | MGI Sequence Detail 2992 C57BL/6J ±  kb
transcript NM_013893 RefSeq | MGI Sequence Detail 782 Not Specified  
polypeptide NP_038921 RefSeq | MGI Sequence Detail 175 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR050111 C-type lectin and snaclec domain-containing protein
    IPR018378 C-type lectin, conserved site
    IPR016187 C-type lectin fold
    IPR001304 C-type lectin-like
    IPR016186 C-type lectin-like/link domain superfamily
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 15
  • Earliest
    J:58589 Sasahara K, et al., Molecular cloning and tissue-specific expression of a new member of the regenerating protein family, islet neogenesis-associated protein-related protein. Biochim Biophys Acta. 2000 Jan 3;1500(1):142-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory