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Lmo7 Gene Detail
Summary
  • Symbol
    Lmo7
  • Name
    LIM domain only 7
  • Synonyms
    FBXO20, LOC380928, mKIAA0858
  • Feature Type
    protein coding gene
  • IDs
    MGI:1353586
    NCBI Gene: 380928
  • Alliance
    gene page
  • Transcription Start Sites
    40 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:101967393-102172146 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 50.90 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    6406 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1353586
 protein coding gene Chr14:101967353-102172146 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021625
 protein coding gene Chr14:98165990-98379299 (+)
A/J MGP_AJ_G0021583
 protein coding gene Chr14:94956872-95157342 (+)
AKR/J MGP_AKRJ_G0021559
 protein coding gene Chr14:97765074-97981288 (+)
BALB/cJ MGP_BALBcJ_G0021589
 protein coding gene Chr14:95293381-95501988 (+)
C3H/HeJ MGP_C3HHeJ_G0021367
 protein coding gene Chr14:97675579-97885365 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022029
 protein coding gene Chr14:102124253-102344716 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019569
 protein coding gene Chr14:91892967-92099387 (+)
CAST/EiJ MGP_CASTEiJ_G0020884
 protein coding gene Chr14:95004728-95214913 (+)
CBA/J MGP_CBAJ_G0021335
 protein coding gene Chr14:105888096-106110800 (+)
DBA/2J MGP_DBA2J_G0021459
 protein coding gene Chr14:94442378-94652109 (+)
FVB/NJ MGP_FVBNJ_G0021436
 protein coding gene Chr14:93431879-93634470 (+)
LP/J MGP_LPJ_G0021527
 protein coding gene Chr14:98969196-99185655 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021463
 protein coding gene Chr14:108614373-108822641 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022052
 protein coding gene Chr14:97283046-97499545 (+)
PWK/PhJ MGP_PWKPhJ_G0020627
 protein coding gene Chr14:91451528-91658108 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020465
 protein coding gene Chr14:93318117-93539986 (+)
WSB/EiJ MGP_WSBEiJ_G0020937
 protein coding gene Chr14:97936406-98142970 (+)



Homology
more
  • Human Ortholog
    LMO7, LIM domain 7
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LMO7, LIM domain 7
  • Synonyms
    FBX20, FBXO20, LMO7b, LOMP
  • Links
    NCBI Gene ID: 4008
    neXtProt AC: NX_Q8WWI1
    UniProt: Q8WWI1

  • Chr Location
    13q22.2; chr13:75620434-75859870 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotypes from 2 alleles in 3 genetic backgrounds
    17 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Targeted mutations in this gene result in postnatal lethality, growth defects, skeletal muscle abnormalities and retinal defects reflective of retinal degeneration.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    824
  • Tissues
    78
  • cDNA Data
    14
  • Literature Summary
    10
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000033060 Ensembl Gene Model | MGI Sequence Detail 204754 C57BL/6J ±  kb
    transcript ENSMUST00000100337 Ensembl | MGI Sequence Detail 6092 Not Applicable  
    polypeptide ENSMUSP00000097910 Ensembl | MGI Sequence Detail 1699 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 18
      Genomic 2
      cDNA 14
      Primer pair 1
      Other 1

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:2685760
    References
    more
    • Summaries
      All 47
      Developmental Gene Expression 10
      Gene Ontology 2
      Phenotypes 17
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:357494 Duan S, et al., Macrophage LMO7 deficiency facilitates inflammatory injury via metabolic-epigenetic reprogramming. Acta Pharm Sin B. 2023 Dec;13(12):4785-4800
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory