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B3galt4 Gene Detail
Summary
  • Symbol
    B3galt4
  • Name
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4
  • Synonyms
    Gal-T2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859517
    NCBI Gene: 54218
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34168886-34170462 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859517
 protein coding gene Chr17:34168883-34170462 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023547
 protein coding gene Chr17:33899315-33900883 (-)
A/J MGP_AJ_G0023508
 protein coding gene Chr17:32732960-32734510 (-)
AKR/J MGP_AKRJ_G0023474
 protein coding gene Chr17:33127929-33129479 (-)
BALB/cJ MGP_BALBcJ_G0023511
 protein coding gene Chr17:32905184-32906734 (-)
C3H/HeJ MGP_C3HHeJ_G0023273
 protein coding gene Chr17:33483285-33484835 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023953
 protein coding gene Chr17:35152390-35153958 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021427
 protein coding gene Chr17:30235211-30236756 (-)
CAST/EiJ MGP_CASTEiJ_G0022775
 protein coding gene Chr17:33559869-33561419 (-)
CBA/J MGP_CBAJ_G0023250
 protein coding gene Chr17:36585210-36586760 (-)
DBA/2J MGP_DBA2J_G0023378
 protein coding gene Chr17:32109883-32111433 (-)
FVB/NJ MGP_FVBNJ_G0023347
 protein coding gene Chr17:31976922-31978472 (-)
LP/J MGP_LPJ_G0023456
 protein coding gene Chr17:34174523-34176091 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023369
 protein coding gene Chr17:35633593-35635143 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023994
 protein coding gene Chr17:33456105-33457655 (-)
PWK/PhJ MGP_PWKPhJ_G0022523
 protein coding gene Chr17:31024661-31026211 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022339
 protein coding gene Chr17:31419180-31420730 (-)
WSB/EiJ MGP_WSBEiJ_G0022835
 protein coding gene Chr17:33494021-33496585 (-)



Homology
more
  • Human Ortholog
    B3GALT4, beta-1,3-galactosyltransferase 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    B3GALT4, beta-1,3-galactosyltransferase 4
  • Synonyms
    BETA3GALT4, GALT2, GALT4
  • Links
    NCBI Gene ID: 8705
    neXtProt AC: NX_O96024
    UniProt: O96024

  • Chr Location
    6p21.32; chr6:33277123-33284832 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    816
  • Tissues
    108
  • cDNA Data
    10
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 54218 NCBI Gene Model | MGI Sequence Detail 1577 C57BL/6J ±  kb
transcript NM_019420 RefSeq | MGI Sequence Detail 1599 Not Specified  
polypeptide Q9Z0F0 UniProt | EBI | MGI Sequence Detail 371 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    Genomic 1
    cDNA 10
    Primer pair 3

    Microarray probesets 2
References
more
  • Summaries
    All 32
    Developmental Gene Expression 3
    Gene Ontology 7
    Phenotypes 3
  • Earliest
    J:63110 Allcock RJ, et al., The mouse as a model for the effects of MHC genes on human disease. Immunol Today. 2000 Jul;21(7):328-32
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory