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Magix Gene Detail
Summary
  • Symbol
    Magix
  • Name
    MAGI family member, X-linked
  • Synonyms
    Pdzx, Sfc18
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859644
    NCBI Gene: 54634
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:7539405-7547490 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 3.46 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859644
 protein coding gene ChrX:7539403-7547490 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035518
 protein coding gene ChrX:2285825-2293896 (-)
A/J MGP_AJ_G0035496
 protein coding gene ChrX:2248323-2256344 (-)
AKR/J MGP_AKRJ_G0035429
 protein coding gene ChrX:2353636-2365055 (-)
BALB/cJ MGP_BALBcJ_G0035492
 protein coding gene ChrX:2267941-2278218 (-)
C3H/HeJ MGP_C3HHeJ_G0035200
 protein coding gene ChrX:2318656-2328443 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036016
 protein coding gene ChrX:2360684-2370102 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032892
 protein coding gene ChrX:1813918-1821971 (-)
CAST/EiJ MGP_CASTEiJ_G0034501
 protein coding gene ChrX:2222049-2230133 (-)
CBA/J MGP_CBAJ_G0035170
 protein coding gene ChrX:2487259-2495330 (-)
DBA/2J MGP_DBA2J_G0035327
 protein coding gene ChrX:2269050-2278673 (-)
FVB/NJ MGP_FVBNJ_G0035274
 protein coding gene ChrX:2230440-2238919 (-)
LP/J MGP_LPJ_G0035405
 protein coding gene ChrX:2286677-2295180 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035314
 protein coding gene ChrX:2444273-2453307 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036034
 protein coding gene ChrX:2274552-2282636 (-)
PWK/PhJ MGP_PWKPhJ_G0034202
 protein coding gene ChrX:2206884-2215118 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034040
 protein coding gene ChrX:2239677-2249520 (-)
WSB/EiJ MGP_WSBEiJ_G0034624
 protein coding gene ChrX:2276130-2284177 (-)



Homology
more
  • Human Ortholog
    MAGIX, MAGI family member, X-linked
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MAGIX, MAGI family member, X-linked
  • Synonyms
    JM10, PDZX
  • Links
    NCBI Gene ID: 79917
    neXtProt AC: NX_Q9H6Y5
    UniProt: Q9H6Y5

  • Chr Location
    Xp11.23; chrX:49162564-49168774 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 54634 NCBI Gene Model | MGI Sequence Detail 8086 C57BL/6J ±  kb
    transcript NM_018832 RefSeq | MGI Sequence Detail 2802 ZRU/MplStud  
    polypeptide Q4KL35 UniProt | EBI | MGI Sequence Detail 324 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 16
      Genomic 5
      cDNA 11

      Microarray probesets 2
    References
    more
    • Summaries
      All 28
      Phenotypes 9
    • Earliest
      J:62168 Means GD, et al., A transcript map of a 2-Mb BAC contig in the proximal portion of the mouse X chromosome and regional mapping of the scurfy mutation. Genomics. 2000 May 1;65(3):213-23
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/17/2024
    MGI 6.24     		The Jackson Laboratory