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Rbms1 Gene Detail
Summary
  • Symbol
    Rbms1
  • Name
    RNA binding motif, single stranded interacting protein 1
  • Synonyms
    2600014B10Rik, MSSP-1, MSSP-2, MSSP-3, YC1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1861774
    NCBI Gene: 56878
  • Alliance
    gene page
  • Transcription Start Sites
    33 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:60580537-60793536 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 34.95 cM, cytoband C3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5414 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1861774
 protein coding gene Chr2:60580537-60794224 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025764
 protein coding gene Chr2:60354963-60580342 (-)
A/J MGP_AJ_G0025740
 protein coding gene Chr2:58039409-58254978 (-)
AKR/J MGP_AKRJ_G0025710
 protein coding gene Chr2:59628749-59849476 (-)
BALB/cJ MGP_BALBcJ_G0025735
 protein coding gene Chr2:58159407-58373520 (-)
C3H/HeJ MGP_C3HHeJ_G0025496
 protein coding gene Chr2:59732873-59956095 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026182
 protein coding gene Chr2:62136625-62361169 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023586
 protein coding gene Chr2:55584328-55800887 (-)
CAST/EiJ MGP_CASTEiJ_G0024960
 protein coding gene Chr2:59770248-59993625 (-)
CBA/J MGP_CBAJ_G0025476
 protein coding gene Chr2:64484153-64720414 (-)
DBA/2J MGP_DBA2J_G0025607
 protein coding gene Chr2:57624351-57840564 (-)
FVB/NJ MGP_FVBNJ_G0025569
 protein coding gene Chr2:57169818-57386173 (-)
LP/J MGP_LPJ_G0025695
 protein coding gene Chr2:60198337-60418868 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025600
 protein coding gene Chr2:66101183-66322781 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026239
 protein coding gene Chr2:59661966-59885647 (-)
PWK/PhJ MGP_PWKPhJ_G0024701
 protein coding gene Chr2:57488925-57706356 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024508
 protein coding gene Chr2:59759148-59983191 (-)
WSB/EiJ MGP_WSBEiJ_G0025028
 protein coding gene Chr2:59946008-60179681 (-)



Homology
more
  • Human Ortholog
    RBMS1, RNA binding motif single stranded interacting protein 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBMS1, RNA binding motif single stranded interacting protein 1
  • Synonyms
    C2orf12, HCC-4, MSSP, MSSP-1, MSSP-2, MSSP-3, SCR2, YC1
  • Links
    NCBI Gene ID: 5937
    neXtProt AC: NX_P29558
    UniProt: P29558

  • Chr Location
    2q24.2; chr2:160272151-160493807 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotypes from 2 alleles in 2 genetic backgrounds
    20 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Only about half the expected number of mice homozygous for disruptions in this gene are produced in matings of heterozygotes. Embryo sizes are reduced. Females have smaller than normal uteri and decreased levels of progesterone during estrus.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    836
  • Tissues
    95
  • cDNA Data
    24
  • Literature Summary
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000026970 Ensembl Gene Model | MGI Sequence Detail 213000 C57BL/6J ±  kb
    transcript ENSMUST00000164147 Ensembl | MGI Sequence Detail 2543 Not Applicable  
    polypeptide ENSMUSP00000131306 Ensembl | MGI Sequence Detail 417 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 27
      cDNA 25
      Primer pair 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1919705, MGI:2138868
    References
    more
    • Summaries
      All 52
      Developmental Gene Expression 5
      Gene Ontology 5
      Phenotypes 20
    • Earliest
      J:59635 Fujimoto M, et al., Structures and comparison of genomic and complementary DNAs of mouse MSSP, a c-Myc binding protein. Int J Oncol. 2000 Feb;16(2):245-51
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory