Banp MGI Mouse Gene Detail - MGI:1889023 - BTG3 associated nuclear protein

Symbol

Banp
Name

BTG3 associated nuclear protein
Synonyms

SMAR1

Feature Type

protein coding gene
IDs

MGI:1889023
NCBI Gene: 53325
Alliance

gene page
Transcription Start Sites

8 TSS

Sequence Map

Chr8:122676489-122755997 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 8, 70.82 cM
Mapping Data

3 experiments

SNPs within 2kb

1971 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1889023	protein coding gene	Chr8:122674711-122755999 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0034219	protein coding gene	Chr8:125475156-125558405 (+)
A/J	MGP_AJ_G0034199	protein coding gene	Chr8:120267860-120347225 (+)
AKR/J	MGP_AKRJ_G0034126	protein coding gene	Chr8:123794623-123873439 (+)
BALB/cJ	MGP_BALBcJ_G0034193	protein coding gene	Chr8:120471763-120551316 (+)
C3H/HeJ	MGP_C3HHeJ_G0033904	protein coding gene	Chr8:124485236-124565829 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0034713	protein coding gene	Chr8:129656890-129738002 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031655	protein coding gene	Chr8:113102313-113179219 (+)
CAST/EiJ	MGP_CASTEiJ_G0033231	protein coding gene	Chr8:124541720-124626856 (+)
CBA/J	MGP_CBAJ_G0033877	protein coding gene	Chr8:134444197-134531046 (+)
DBA/2J	MGP_DBA2J_G0034033	protein coding gene	Chr8:119464706-119544069 (+)
FVB/NJ	MGP_FVBNJ_G0033976	protein coding gene	Chr8:118577239-118656420 (+)
LP/J	MGP_LPJ_G0034122	protein coding gene	Chr8:125594417-125673059 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0034023	protein coding gene	Chr8:136636963-136717733 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034731	protein coding gene	Chr8:123962376-124047033 (+)
PWK/PhJ	MGP_PWKPhJ_G0032933	protein coding gene	Chr8:119271306-119352814 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0032773	protein coding gene	Chr8:122673454-122756894 (+)
WSB/EiJ	MGP_WSBEiJ_G0033347	protein coding gene	Chr8:124720699-124801580 (+)

Human Ortholog

BANP, BTG3 associated nuclear protein

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

BANP, BTG3 associated nuclear protein
Synonyms

BEND1, SMAR1, SMARBP1
Links

HGNC:13450

NCBI Gene ID: 54971

neXtProt AC: NX_Q8N9N5

UniProt: Q8N9N5
Chr Location

16q24.2; chr16:87949238-88077318 (+) GRCh38

MGI Vertebrate Homology

Banp stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: BANP
Gene Tree

Banp

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Phenotype Summary

4 phenotypes from 1 allele in 1 genetic background
11 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

9
Endonuclease-mediated

4
Gene trapped

1
Targeted

4
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

107 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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All GO Annotations

11
GO References

6

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

808
Tissues

102
cDNA Data

96
Literature Summary

4

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase banp

ZFIN banp

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All Sequences

118
RefSeq

36
UniProt

6
CCDS

CCDS40502.1, CCDS72176.1, CCDS72177.1

Ensembl

ENSMUSG00000025316 (Evidence)
NCBI Gene

53325

			Length	Strain/Species	Flank
genomic	ENSMUSG00000025316	Ensembl Gene Model \| MGI Sequence Detail	79509	C57BL/6J	± kb
transcript	ENSMUST00000170857	Ensembl \| MGI Sequence Detail	5444	Not Applicable
polypeptide	ENSMUSP00000132095	Ensembl \| MGI Sequence Detail	548	Not Applicable

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UniProt

6 Sequences
Protein Ontology

PR:000004640 protein BANP

(term hierarchy)
InterPro Domains

IPR018379 BEN domain

IPR042343 Protein BANP

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All nucleic 97

cDNA 97

Microarray probesets 3

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MGI:2142401

Summaries

All 44

Developmental Gene Expression 4

Gene Ontology 6

Phenotypes 11
Earliest

J:63908 Birot A, et al., Identification and molecular analysis of BANP. Gene. 2000 Aug 8;253(2):189-96
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Banp:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr79833	Chr8:122674691-122674718 (+)	-1,784 bp
Tssr79834	Chr8:122677296-122677395 (+)	857 bp
Tssr79835	Chr8:122677414-122677426 (+)	931 bp
Tssr79836	Chr8:122677482-122677505 (+)	1,005 bp
Tssr79837	Chr8:122733610-122733626 (+)	57,129 bp
Tssr79838	Chr8:122733654-122733675 (+)	57,176 bp
Tssr79839	Chr8:122741936-122741956 (+)	65,457 bp
Tssr79840	Chr8:122752530-122752549 (+)	76,051 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24