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Lhfpl1 Gene Detail
Summary
  • Symbol
    Lhfpl1
  • Name
    lipoma HMGIC fusion partner-like 1
  • Synonyms
    Lhfp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891214
    NCBI Gene: 237091
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:144073355-144132085 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 66.54 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1240 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891214
 protein coding gene ChrX:144073355-144155388 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036161
 protein coding gene ChrX:142840391-142899978 (-)
A/J MGP_AJ_G0036138
 protein coding gene ChrX:142175905-142233221 (-)
AKR/J MGP_AKRJ_G0036064
 protein coding gene ChrX:146805207-146864785 (-)
BALB/cJ MGP_BALBcJ_G0036129
 protein coding gene ChrX:140374276-140434603 (-)
C3H/HeJ MGP_C3HHeJ_G0035837
 protein coding gene ChrX:142967536-143028171 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036653
 protein coding gene ChrX:146877323-146941118 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033476
 protein coding gene ChrX:133676875-133725184 (-)
CAST/EiJ MGP_CASTEiJ_G0035128
 protein coding gene ChrX:123558331-123608707 (-)
CBA/J MGP_CBAJ_G0035814
 protein coding gene ChrX:151389181-151458935 (-)
DBA/2J MGP_DBA2J_G0035972
 protein coding gene ChrX:141241514-141295731 (-)
FVB/NJ MGP_FVBNJ_G0035906
 protein coding gene ChrX:140454635-140509868 (-)
LP/J MGP_LPJ_G0036063
 protein coding gene ChrX:143802831-143857181 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035942
 protein coding gene ChrX:159272624-159346654 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036689
 protein coding gene ChrX:142126690-142197513 (-)
PWK/PhJ MGP_PWKPhJ_G0034822
 protein coding gene ChrX:120307818-120357120 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034648
 protein coding gene ChrX:124102568-124157314 (-)
WSB/EiJ MGP_WSBEiJ_G0035263
 protein coding gene ChrX:140486683-140547585 (-)



Homology
more
  • Human Ortholog
    LHFPL1, LHFPL tetraspan subfamily member 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LHFPL1, LHFPL tetraspan subfamily member 1
  • Links
    NCBI Gene ID: 340596
    neXtProt AC: NX_Q86WI0
    UniProt: Q86WI0

  • Chr Location
    Xq23
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    728
  • Tissues
    13
  • cDNA Data
    4
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000041700 Ensembl Gene Model | MGI Sequence Detail 58731 C57BL/6J ±  kb
    transcript ENSMUST00000040084 Ensembl | MGI Sequence Detail 1830 Not Applicable  
    polypeptide ENSMUSP00000044054 Ensembl | MGI Sequence Detail 220 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 4
      Primer pair 1

      Microarray probesets 1
    References
    more
    • Summaries
      All 24
      Developmental Gene Expression 2
      Gene Ontology 2
      Phenotypes 5
    • Earliest
      J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory