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Cwc15 Gene Detail
Summary
  • Symbol
    Cwc15
  • Name
    CWC15 spliceosome-associated protein
  • Synonyms
    0610040D20Rik, 2900052N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913320
    NCBI Gene: 66070
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:14411913-14421873 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 4.09 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    320 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913320
 protein coding gene Chr9:14411876-14421920 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034350
 protein coding gene Chr9:11441327-11451998 (+)
A/J MGP_AJ_G0034328
 protein coding gene Chr9:11395984-11405944 (+)
AKR/J MGP_AKRJ_G0034256
 protein coding gene Chr9:11401063-11411018 (+)
BALB/cJ MGP_BALBcJ_G0034322
 protein coding gene Chr9:11149687-11159648 (+)
C3H/HeJ MGP_C3HHeJ_G0034033
 protein coding gene Chr9:11701937-11711892 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034844
 protein coding gene Chr9:11821924-11831927 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031782
 protein coding gene Chr9:10692333-10702467 (+)
CAST/EiJ MGP_CASTEiJ_G0033360
 protein coding gene Chr9:11523252-11533320 (+)
CBA/J MGP_CBAJ_G0034006
 protein coding gene Chr9:12360988-12370919 (+)
DBA/2J MGP_DBA2J_G0034163
 protein coding gene Chr9:11279630-11289591 (+)
FVB/NJ MGP_FVBNJ_G0034108
 protein coding gene Chr9:10863768-10873892 (+)
LP/J MGP_LPJ_G0034249
 protein coding gene Chr9:11535032-11544992 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034152
 protein coding gene Chr9:13430626-13440586 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034863
 protein coding gene Chr9:11426819-11436783 (+)
PWK/PhJ MGP_PWKPhJ_G0033066
 protein coding gene Chr9:11333089-11343091 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032902
 protein coding gene Chr9:11485484-11495611 (+)
WSB/EiJ MGP_WSBEiJ_G0033476
 protein coding gene Chr9:11258293-11268256 (+)



Homology
more
  • Human Ortholog
    CWC15, CWC15 spliceosome associated protein homolog
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CWC15, CWC15 spliceosome associated protein homolog
  • Synonyms
    AD002, C11orf5, Cwf15, HSPC148, ORF5
  • Links
    NCBI Gene ID: 51503
    neXtProt AC: NX_Q9P013
    UniProt: Q9P013

  • Chr Location
    11q21; chr11:94962620-94973586 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    23
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    130
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000004096 Ensembl Gene Model | MGI Sequence Detail 9961 C57BL/6J ±  kb
transcript ENSMUST00000004200 Ensembl | MGI Sequence Detail 1111 Not Applicable  
polypeptide ENSMUSP00000004200 Ensembl | MGI Sequence Detail 229 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 130
    cDNA 130

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920279
References
more
  • Summaries
    All 35
    Gene Ontology 6
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:320339 Chanarat S, et al., Splicing and beyond: the many faces of the Prp19 complex. Biochim Biophys Acta. 2013 Oct;1833(10):2126-34
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory