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Tceal3 Gene Detail
Summary
  • Symbol
    Tceal3
  • Name
    transcription elongation factor A (SII)-like 3
  • Synonyms
    1100001D19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913354
    NCBI Gene: 594844
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:135491591-135569127 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 59.10 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2059 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913354
 protein coding gene ChrX:135491586-135569127 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036101
 protein coding gene ChrX:133990802-134047629 (+)
A/J MGP_AJ_G0036080
 protein coding gene ChrX:133381919-133470397 (+)
AKR/J MGP_AKRJ_G0036006
 protein coding gene ChrX:137655042-137711161 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036594
 protein coding gene ChrX:137886212-137969225 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035068
 protein coding gene ChrX:114818150-114887409 (+)
CBA/J MGP_CBAJ_G0035756
 protein coding gene ChrX:142116776-142207565 (+)
DBA/2J MGP_DBA2J_G0035912
 protein coding gene ChrX:132697770-132773110 (+)
FVB/NJ MGP_FVBNJ_G0035847
 protein coding gene ChrX:131889931-131982385 (+)
LP/J MGP_LPJ_G0036007
 protein coding gene ChrX:134964419-135026289 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035881
 protein coding gene ChrX:149438262-149517734 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036632
 protein coding gene ChrX:133344892-133416852 (+)
PWK/PhJ MGP_PWKPhJ_G0034761
 protein coding gene ChrX:111855745-111922387 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034589
 protein coding gene ChrX:115448113-115518034 (+)
WSB/EiJ MGP_WSBEiJ_G0035203
 protein coding gene ChrX:131680335-131740583 (+)



Homology
more
  • Human Ortholog
    TCEAL3, transcription elongation factor A like 3
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCEAL3, transcription elongation factor A like 3
  • Synonyms
    WEX8
  • Links
    NCBI Gene ID: 85012
    neXtProt AC: NX_Q969E4
    UniProt: Q969E4

  • Chr Location
    Xq22.2; chrX:103607451-103629690 (+)  GRCh38
  • Human Ortholog
    TCEAL6, transcription elongation factor A like 6
  • Synonyms
    Tceal3, WEX2
  • Links
    NCBI Gene ID: 158931
    UniProt: Q6IPX3

  • Chr Location
    Xq22.1; chrX:102138502-102142970 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    846
  • Tissues
    32
  • cDNA Data
    12
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000044550 Ensembl Gene Model | MGI Sequence Detail 77537 C57BL/6J ±  kb
    transcript ENSMUST00000113100 Ensembl | MGI Sequence Detail 1148 Not Applicable  
    polypeptide ENSMUSP00000108724 Ensembl | MGI Sequence Detail 200 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      3 Sequences
    • InterPro Domains
      IPR021156 Transcription elongation factor A-like/Brain expressed X-linked
    • GlyGen
      Q8R0A5 1 site, 1 O-linked glycan (1 site)
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 13
      Primer pair 1
      Other 1

      Microarray probesets 1
    References
    more
    • Summaries
      All 21
      Developmental Gene Expression 3
      Diseases 1
      Gene Ontology 1
      Phenotypes 4
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory