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Tma7 Gene Detail
Summary
  • Symbol
    Tma7
  • Name
    translational machinery associated 7
  • Synonyms
    1110017O22Rik, Ccdc72
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913417
    NCBI Gene: 66167
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:108907056-108911449 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 59.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913417
 protein coding gene Chr9:108903636-108911655 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035325
 protein coding gene Chr9:111032717-111041139 (-)
A/J MGP_AJ_G0035304
 protein coding gene Chr9:106947684-106955695 (-)
AKR/J MGP_AKRJ_G0035236
 protein coding gene Chr9:109641201-109649295 (-)
BALB/cJ MGP_BALBcJ_G0035298
 protein coding gene Chr9:106648279-106656472 (-)
C3H/HeJ MGP_C3HHeJ_G0035008
 protein coding gene Chr9:110031385-110043172 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035818
 protein coding gene Chr9:114057875-114068243 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032716
 protein coding gene Chr9:104354573-104362614 (-)
CAST/EiJ MGP_CASTEiJ_G0034319
 protein coding gene Chr9:110004432-110012585 (-)
CBA/J MGP_CBAJ_G0034976
 protein coding gene Chr9:118072829-118086581 (-)
DBA/2J MGP_DBA2J_G0035137
 protein coding gene Chr9:106403536-106411665 (-)
FVB/NJ MGP_FVBNJ_G0035085
 protein coding gene Chr9:105223022-105231798 (-)
LP/J MGP_LPJ_G0035213
 protein coding gene Chr9:111216986-111226808 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035124
 protein coding gene Chr9:119624855-119645605 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035839
 protein coding gene Chr9:109910614-109918546 (-)
PWK/PhJ MGP_PWKPhJ_G0034026
 protein coding gene Chr9:106740266-106748412 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033861
 protein coding gene Chr9:109976140-109986175 (-)
WSB/EiJ MGP_WSBEiJ_G0034440
 protein coding gene Chr9:109809428-109818418 (-)



Homology
more
  • Human Ortholog
    TMA7, translation machinery associated 7 homolog
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMA7, translation machinery associated 7 homolog
  • Synonyms
    CCDC72, HSPC016
  • Links
    NCBI Gene ID: 51372
    neXtProt AC: NX_Q9Y2S6
    UniProt: Q9Y2S6

  • Chr Location
    3p21.31; chr3:48440257-48444208 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    5
  • cDNA Data
    8
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66167 NCBI Gene Model | MGI Sequence Detail 4394 C57BL/6J ±  kb
transcript NM_183250 RefSeq | MGI Sequence Detail 637 C57BL/6  
polypeptide Q8K003 UniProt | EBI | MGI Sequence Detail 64 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Developmental Gene Expression 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:210222 Hupe M, et al., Evaluation of TRAP-sequencing technology with a versatile conditional mouse model. Nucleic Acids Res. 2014 Jan;42(2):e14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory