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Ubl5 Gene Detail
Summary
  • Symbol
    Ubl5
  • Name
    ubiquitin-like 5
  • Synonyms
    1110030M22Rik, BEACON, Ubl5a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913427
    NCBI Gene: 66177
  • Alliance
    gene page
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:20554174-20558436 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 7.60 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    194 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913427
 protein coding gene Chr9:20554013-20558436 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034423
 protein coding gene Chr9:17786145-17791388 (+)
A/J MGP_AJ_G0034401
 protein coding gene Chr9:17505621-17509883 (+)
AKR/J MGP_AKRJ_G0034328
 protein coding gene Chr9:17823209-17829168 (+)
BALB/cJ MGP_BALBcJ_G0034392
 protein coding gene Chr9:17409738-17414000 (+)
C3H/HeJ MGP_C3HHeJ_G0034104
 protein coding gene Chr9:18136962-18141224 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034913
 protein coding gene Chr9:18507189-18511451 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031843
 protein coding gene Chr9:16641875-16645820 (+)
CAST/EiJ MGP_CASTEiJ_G0033427
 protein coding gene Chr9:17946890-17951178 (+)
CBA/J MGP_CBAJ_G0034077
 protein coding gene Chr9:19220137-19226938 (+)
DBA/2J MGP_DBA2J_G0034236
 protein coding gene Chr9:17502158-17506420 (+)
FVB/NJ MGP_FVBNJ_G0034179
 protein coding gene Chr9:17001849-17006125 (+)
LP/J MGP_LPJ_G0034321
 protein coding gene Chr9:17973137-17977399 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034222
 protein coding gene Chr9:20857321-20861587 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034933
 protein coding gene Chr9:17770304-17774580 (+)
PWK/PhJ MGP_PWKPhJ_G0033133
 protein coding gene Chr9:17463082-17467561 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032967
 protein coding gene Chr9:17808975-17813278 (+)
WSB/EiJ MGP_WSBEiJ_G0033542
 protein coding gene Chr9:17500611-17504887 (+)



Homology
more
  • Human Ortholog
    UBL5, ubiquitin like 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBL5, ubiquitin like 5
  • Synonyms
    HUB1
  • Links
    NCBI Gene ID: 59286
    neXtProt AC: NX_Q9BZL1
    UniProt: Q9BZL1

  • Chr Location
    19p13.2; chr19:9827892-9830115 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    714
  • Tissues
    8
  • cDNA Data
    15
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084786 Ensembl Gene Model | MGI Sequence Detail 4263 C57BL/6J ±  kb
transcript ENSMUST00000161882 Ensembl | MGI Sequence Detail 489 Not Applicable  
polypeptide ENSMUSP00000125540 Ensembl | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 15
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:342644 Tscherner AK, et al., Relationship of quantitative reverse transcription polymerase chain reaction (RT-PCR) to RNA Sequencing (RNAseq) transcriptome identifies mouse preimplantation embryo reference genes. Biol Reprod. 2023 Nov 15;109(5):601-617
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory