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Lce1g Gene Detail
Summary
  • Symbol
    Lce1g
  • Name
    late cornified envelope 1G
  • Synonyms
    1110058A15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913445
    NCBI Gene: 66195
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92657458-92659645 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    182 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913445
 protein coding gene Chr3:92657455-92659645 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027514
 protein coding gene Chr3:93210044-93214354 (-)
A/J MGP_AJ_G0027481
 protein coding gene Chr3:90274885-90276977 (-)
AKR/J MGP_AKRJ_G0027446
 protein coding gene Chr3:92395939-92398039 (-)
BALB/cJ MGP_BALBcJ_G0027489
 protein coding gene Chr3:90084353-90086385 (-)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0025280
 protein coding gene Chr3:86928704-86943274 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0027203
 protein coding gene Chr3:100079033-100081085 (-)
DBA/2J MGP_DBA2J_G0027341
 protein coding gene Chr3:89604442-89606432 (-)
FVB/NJ MGP_FVBNJ_G0027309
 protein coding gene Chr3:87765866-87767895 (-)
LP/J MGP_LPJ_G0027449
 protein coding gene Chr3:94428667-94432934 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027334
 protein coding gene Chr3:106361032-106363456 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    LCE1A, late cornified envelope 1A
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LCE1A, late cornified envelope 1A
  • Synonyms
    LEP1
  • Links
    NCBI Gene ID: 353131
    neXtProt AC: NX_Q5T7P2
    UniProt: Q5T7P2

  • Chr Location
    1q21.3; chr1:152827473-152828097 (+)  GRCh38
  • Human Ortholog
    LCE1B, late cornified envelope 1B
  • Synonyms
    LEP2, SPRL2A
  • Links
    NCBI Gene ID: 353132
    neXtProt AC: NX_Q5T7P3
    UniProt: Q5T7P3

  • Chr Location
    1q21.3
  • Human Ortholog
    LCE1C, late cornified envelope 1C
  • Synonyms
    LEP3
  • Links
    NCBI Gene ID: 353133
    neXtProt AC: NX_Q5T751
    UniProt: Q5T751

  • Chr Location
    1q21.3; chr1:152804832-152806651 (-)  GRCh38
  • Human Ortholog
    LCE1E, late cornified envelope 1E
  • Synonyms
    LEP5
  • Links
    NCBI Gene ID: 353135
    neXtProt AC: NX_Q5T753
    UniProt: Q5T753

  • Chr Location
    1q21.3; chr1:152786214-152788426 (+)  GRCh38
  • Human Ortholog
    LCE1F, late cornified envelope 1F
  • Synonyms
    LEP6
  • Links
    NCBI Gene ID: 353137
    neXtProt AC: NX_Q5T754
    UniProt: Q5T754

  • Chr Location
    1q21.3; chr1:152775140-152777024 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Lce1g
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66195 NCBI Gene Model | MGI Sequence Detail 2188 C57BL/6J ±  kb
transcript NM_025413 RefSeq | MGI Sequence Detail 922 C57BL/6  
polypeptide NP_079689 RefSeq | MGI Sequence Detail 139 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR028205 Late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139763
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory