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Rpl36al Gene Detail
Summary
  • Symbol
    Rpl36al
  • Name
    ribosomal protein L36A-like
  • Synonyms
    2410038A03Rik, RPL36A
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913733
    NCBI Gene: 66483
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:69229508-69230841 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 28.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    100 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913733
 protein coding gene Chr12:69229505-69230857 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019787
 protein coding gene Chr12:68845134-68846485 (-)
A/J MGP_AJ_G0019745
 protein coding gene Chr12:66294246-66295598 (-)
AKR/J MGP_AKRJ_G0019721
 protein coding gene Chr12:68279134-68281642 (-)
BALB/cJ MGP_BALBcJ_G0019725
 protein coding gene Chr12:66756317-66757669 (-)
C3H/HeJ MGP_C3HHeJ_G0019531
 protein coding gene Chr12:68744547-68746870 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020177
 protein coding gene Chr12:71037863-71039619 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017797
 protein coding gene Chr12:63838965-63840240 (-)
CAST/EiJ MGP_CASTEiJ_G0019082
 protein coding gene Chr12:63495737-63497089 (-)
CBA/J MGP_CBAJ_G0019500
 protein coding gene Chr12:73665004-73668276 (-)
DBA/2J MGP_DBA2J_G0019616
 protein coding gene Chr12:66210441-66212014 (-)
FVB/NJ MGP_FVBNJ_G0032315
 protein coding gene Chr7:96831689-96832102 (-)
LP/J MGP_LPJ_G0019688
 protein coding gene Chr12:68804943-68806295 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019642
 protein coding gene Chr12:77016837-77020072 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020212
 protein coding gene Chr12:67744741-67746092 (-)
PWK/PhJ MGP_PWKPhJ_G0015192
 protein coding gene Chr1:55085247-55085811 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024465
 protein coding gene Chr2:47930146-47930577 (+)
WSB/EiJ MGP_WSBEiJ_G0019133
 protein coding gene Chr12:68363421-68364773 (-)



Homology
more
  • Human Ortholog
    RPL36A, ribosomal protein L36a
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPL36A, ribosomal protein L36a
  • Synonyms
    eL42, L36A, L44L, MIG6, RPL44
  • Links
    NCBI Gene ID: 6173
    neXtProt AC: NX_P83881
    UniProt: P83881

  • Chr Location
    Xq22.1; chrX:101390824-101396155 (+)  GRCh38
  • Human Ortholog
    RPL36AL, ribosomal protein L36a like
  • Synonyms
    RPL36A, RPL36A_18_1363, RPL36AP42
  • Links
    NCBI Gene ID: 6166
    neXtProt AC: NX_Q969Q0
    UniProt: Q969Q0

  • Chr Location
    14q21.3; chr14:49618530-49620626 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66483 NCBI Gene Model | MGI Sequence Detail 1334 C57BL/6J ±  kb
transcript NM_025589 RefSeq | MGI Sequence Detail 525 C57BL/6  
polypeptide NP_079865 RefSeq | MGI Sequence Detail 106 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:136286 Kunarso G, et al., Detailed characterization of the mouse embryonic stem cell transcriptome reveals novel genes and intergenic splicing associated with pluripotency. BMC Genomics. 2008;9:155
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory