1810034E14Rik Gene Detail

Summary

• Symbol
  1810034E14Rik
• Name
  RIKEN cDNA 1810034E14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1913753
  NCBI Gene: 66503
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:64396514-64415959 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 33.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  587 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1913753	lncRNA gene	Chr13:64396451-64419666 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003193	antisense lncRNA gene	Chr13:64269165-64288561 (+)
A/J	MGP_AJ_G0003169	antisense lncRNA gene	Chr13:61941293-61960737 (+)
AKR/J	MGP_AKRJ_G0003151	antisense lncRNA gene	Chr13:63990164-64009542 (+)
BALB/cJ	MGP_BALBcJ_G0003156	antisense lncRNA gene	Chr13:62359200-62378713 (+)
C3H/HeJ	MGP_C3HHeJ_G0003112	antisense lncRNA gene	Chr13:63516077-63535390 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003299	antisense lncRNA gene	Chr13:66333127-66354051 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002826	antisense lncRNA gene	Chr13:59590025-59610763 (+)
CAST/EiJ	MGP_CASTEiJ_G0003080	antisense lncRNA gene	Chr13:63529366-63548303 (+)
CBA/J	MGP_CBAJ_G0003109	antisense lncRNA gene	Chr13:68890171-68911130 (+)
DBA/2J	MGP_DBA2J_G0003114	antisense lncRNA gene	Chr13:61770646-61790484 (+)
FVB/NJ	MGP_FVBNJ_G0003132	antisense lncRNA gene	Chr13:60869532-60888804 (+)
LP/J	MGP_LPJ_G0003190	antisense lncRNA gene	Chr13:64550816-64570226 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003123	antisense lncRNA gene	Chr13:67835393-67854684 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003300	antisense lncRNA gene	Chr13:63303314-63324592 (+)
PWK/PhJ	MGP_PWKPhJ_G0003037	antisense lncRNA gene	Chr13:61332331-61351979 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002983	antisense lncRNA gene	Chr13:61467432-61487827 (+)
WSB/EiJ	MGP_WSBEiJ_G0003112	antisense lncRNA gene	Chr13:63780877-63801541 (+)

Homology

• Gene Tree
  1810034E14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  6
• Genomic Mutations
  1 involving 1810034E14Rik
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  715
• Tissues
  8
• cDNA Data
  4
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000097101 (Evidence)
• NCBI Gene
  66503

Representative Sequences			Length	Strain/Species
genomic	66503	NCBI Gene Model | MGI Sequence Detail	19446	C57BL/6J
transcript	NR_045798	RefSeq | MGI Sequence Detail	1802	C57BL/6
polypeptide	Q3UNW1	UniProt | EBI | MGI Sequence Detail	64	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 5

  cDNA 4

  Primer pair 1

  
  

  Microarray probesets 2

References

• Summaries
  All 20

  Developmental Gene Expression 1

  Phenotypes 6
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398

TSS for 1810034E14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120204	Chr13:64396463-64396489 (+)	-38 bp