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Utp11 Gene Detail
Summary
  • Symbol
    Utp11
  • Name
    UTP11 small subunit processome component
  • Synonyms
    2700082D03Rik, Utp11l
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914455
    NCBI Gene: 67205
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:124571953-124587393 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 57.87 cM, cytoband D1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    472 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914455
 protein coding gene Chr4:124571173-124587395 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028750
 protein coding gene Chr4:126216932-126236220 (-)
A/J MGP_AJ_G0028710
 protein coding gene Chr4:121267111-121288105 (-)
AKR/J MGP_AKRJ_G0028663
 protein coding gene Chr4:124574708-124591827 (-)
BALB/cJ MGP_BALBcJ_G0028732
 protein coding gene Chr4:121848483-121864372 (-)
C3H/HeJ MGP_C3HHeJ_G0028446
 protein coding gene Chr4:124678413-124696660 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029174
 protein coding gene Chr4:131088508-131105937 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026447
 protein coding gene Chr4:114448483-114464853 (-)
CAST/EiJ MGP_CASTEiJ_G0027879
 protein coding gene Chr4:122737274-122752485 (-)
CBA/J MGP_CBAJ_G0028412
 protein coding gene Chr4:134343064-134358337 (-)
DBA/2J MGP_DBA2J_G0028561
 protein coding gene Chr4:121751115-121766261 (-)
FVB/NJ MGP_FVBNJ_G0028528
 protein coding gene Chr4:120370369-120386647 (-)
LP/J MGP_LPJ_G0028663
 protein coding gene Chr4:126520104-126536112 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028554
 protein coding gene Chr4:139340738-139357387 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029212
 protein coding gene Chr4:124951563-124969256 (-)
PWK/PhJ MGP_PWKPhJ_G0027600
 protein coding gene Chr4:118161922-118177364 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027426
 protein coding gene Chr4:120725009-120740322 (-)
WSB/EiJ MGP_WSBEiJ_G0027959
 protein coding gene Chr4:125026216-125041204 (-)



Homology
more
  • Human Ortholog
    UTP11, UTP11 small subunit processome component
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UTP11, UTP11 small subunit processome component
  • Synonyms
    CGI-94, CGI94, UTP11L
  • Links
    NCBI Gene ID: 51118
    neXtProt AC: NX_Q9Y3A2
    UniProt: Q9Y3A2

  • Chr Location
    1p34.3; chr1:38009258-38024820 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    3
  • cDNA Data
    80
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028907 Ensembl Gene Model | MGI Sequence Detail 15441 C57BL/6J ±  kb
transcript ENSMUST00000030738 Ensembl | MGI Sequence Detail 1603 Not Applicable  
polypeptide ENSMUSP00000030738 Ensembl | MGI Sequence Detail 253 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 81
    cDNA 81

    Microarray probesets 4
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory