Armc10 MGI Mouse Gene Detail - MGI:1914461 - armadillo repeat containing 10

Symbol

Armc10
Name

armadillo repeat containing 10
Synonyms

2810037C14Rik

Feature Type

protein coding gene
IDs

MGI:1914461
NCBI Gene: 67211
Alliance

gene page
Transcription Start Sites

3 TSS

Sequence Map

Chr5:21851004-21867697 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 5, 9.97 cM, cytoband A3
Mapping Data

2 experiments

SNPs within 2kb

745 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914461	protein coding gene	Chr5:21850811-21867697 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0029320	protein coding gene	Chr5:19215775-19229947 (+)
A/J	MGP_AJ_G0029285	protein coding gene	Chr5:18584411-18601438 (+)
AKR/J	MGP_AKRJ_G0029236	protein coding gene	Chr5:19292172-19314680 (+)
BALB/cJ	MGP_BALBcJ_G0029297	protein coding gene	Chr5:19022478-19038752 (+)
C3H/HeJ	MGP_C3HHeJ_G0029016	protein coding gene	Chr5:19361401-19382809 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0029750	protein coding gene	Chr5:20617657-20635719 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026989	protein coding gene	Chr5:16639475-16653773 (+)
CAST/EiJ	MGP_CASTEiJ_G0028428	protein coding gene	Chr5:18692454-18710390 (+)
CBA/J	MGP_CBAJ_G0028983	protein coding gene	Chr5:20858208-20864210 (+)
DBA/2J	MGP_DBA2J_G0029135	protein coding gene	Chr5:18868949-18884239 (+)
FVB/NJ	MGP_FVBNJ_G0029093	protein coding gene	Chr5:18276013-18291377 (+)
LP/J	MGP_LPJ_G0029219	protein coding gene	Chr5:19616430-19634214 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0029121	protein coding gene	Chr5:22120223-22138241 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0029783	protein coding gene	Chr5:18952078-18968853 (+)
PWK/PhJ	MGP_PWKPhJ_G0028151	protein coding gene	Chr5:17922294-17940392 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0027984	protein coding gene	Chr5:18315894-18330557 (+)
WSB/EiJ	MGP_WSBEiJ_G0028508	protein coding gene	Chr5:19015304-19034511 (+)

Human Ortholog

ARMC10, armadillo repeat containing 10

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

ARMC10, armadillo repeat containing 10
Synonyms

PNAS-112, PNAS112, PSEC0198, SVH
Links

HGNC:21706

NCBI Gene ID: 83787

neXtProt AC: NX_Q8N2F6

UniProt: Q8N2F6
Chr Location

7q22.1; chr7:103074881-103099759 (+) GRCh38

MGI Vertebrate Homology

Armc10 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: ARMC10
Gene Tree

Armc10

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References

1 with disease annotations

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
16 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

10
Chemically induced (other)

2
Endonuclease-mediated

2
Gene trapped

2
Radiation induced

1
Spontaneous

1
Targeted

2
Genomic Mutations

4 involving Armc10
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

22 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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All GO Annotations

11
GO References

4

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

744
Tissues

12
cDNA Data

89
Literature Summary

3

Images

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase armc10

ZFIN armc10

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All Sequences

50
RefSeq

4
UniProt

2
CCDS

CCDS19104.1

Ensembl

ENSMUSG00000038525 (Evidence)
NCBI Gene

67211

			Length	Strain/Species	Flank
genomic	67211	NCBI Gene Model \| MGI Sequence Detail	16694	C57BL/6J	± kb
transcript	NM_026034	RefSeq \| MGI Sequence Detail	2099	C57BL/6
polypeptide	Q9D0L7	UniProt \| EBI \| MGI Sequence Detail	306	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000004298 armadillo repeat-containing protein 10

(term hierarchy)
InterPro Domains

IPR011989 Armadillo-like helical

IPR006911 Armadillo repeat-containing domain

IPR051303 Armadillo repeat-containing X-linked regulator

IPR016024 Armadillo-type fold
GlyGen

Q9D0L7 1 site, 1 N-linked glycan (1 site)

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All nucleic 92

cDNA 90

Primer pair 1

Other 1

Microarray probesets 4

Summaries

All 41

Developmental Gene Expression 3

Diseases 1

Gene Ontology 4

Phenotypes 16
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;

TSS for Armc10:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr45340	Chr5:21850853-21850883 (+)	-136 bp
Tssr45341	Chr5:21850976-21851030 (+)	-1 bp
Tssr45342	Chr5:21851031-21851055 (+)	39 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24