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Tbc1d19 Gene Detail
Summary
  • Symbol
    Tbc1d19
  • Name
    TBC1 domain family, member 19
  • Synonyms
    2810453K03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914499
    NCBI Gene: 67249
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:53966948-54061307 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 29.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2402 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914499
 protein coding gene Chr5:53966885-54066563 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029556
 protein coding gene Chr5:52896401-52991105 (+)
A/J MGP_AJ_G0029524
 protein coding gene Chr5:51024561-51121651 (+)
AKR/J MGP_AKRJ_G0029472
 protein coding gene Chr5:52776574-52872104 (+)
BALB/cJ MGP_BALBcJ_G0029533
 protein coding gene Chr5:51504782-51599800 (+)
C3H/HeJ MGP_C3HHeJ_G0029256
 protein coding gene Chr5:52937432-53032148 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029987
 protein coding gene Chr5:55041042-55140588 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027227
 protein coding gene Chr5:47744214-47836821 (+)
CAST/EiJ MGP_CASTEiJ_G0028664
 protein coding gene Chr5:51926471-52017111 (+)
CBA/J MGP_CBAJ_G0029225
 protein coding gene Chr5:56797158-56904789 (+)
DBA/2J MGP_DBA2J_G0029371
 protein coding gene Chr5:51070060-51170225 (+)
FVB/NJ MGP_FVBNJ_G0029331
 protein coding gene Chr5:50402567-50496524 (+)
LP/J MGP_LPJ_G0029456
 protein coding gene Chr5:53327079-53421377 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029359
 protein coding gene Chr5:57801493-57905849 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030020
 protein coding gene Chr5:52269716-52364666 (+)
PWK/PhJ MGP_PWKPhJ_G0028388
 protein coding gene Chr5:50135639-50230150 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028222
 protein coding gene Chr5:51704610-51807260 (+)
WSB/EiJ MGP_WSBEiJ_G0028745
 protein coding gene Chr5:52321397-52419022 (+)



Homology
more
  • Human Ortholog
    TBC1D19, TBC1 domain family member 19
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TBC1D19, TBC1 domain family member 19
  • Links
    NCBI Gene ID: 55296
    neXtProt AC: NX_Q8N5T2
    UniProt: Q8N5T2

  • Chr Location
    4p15.2; chr4:26576437-26858919 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    750
  • Tissues
    9
  • cDNA Data
    9
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039178 Ensembl Gene Model | MGI Sequence Detail 94360 C57BL/6J ±  kb
transcript ENSMUST00000037337 Ensembl | MGI Sequence Detail 2273 Not Applicable  
polypeptide ENSMUSP00000040585 Ensembl | MGI Sequence Detail 526 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR000195 Rab-GAP-TBC domain
    IPR035969 Rab-GAP-TBC domain superfamily
    IPR042507 TBC1 domain family member 19
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Phenotypes 20
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory