Zfand4 MGI Mouse Gene Detail - MGI:1914742 - zinc finger, AN1-type domain 4

Symbol

Zfand4
Name

zinc finger, AN1-type domain 4
Synonyms

2810002D23Rik, Anubl1

Feature Type

protein coding gene
IDs

MGI:1914742
NCBI Gene: 67492
Alliance

gene page
Transcription Start Sites

4 TSS

Sequence Map

Chr6:116241183-116307263 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 6, 53.77 cM, cytoband F1
Mapping Data

3 experiments

SNPs within 2kb

1743 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914742	protein coding gene	Chr6:116241046-116310384 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0031164	protein coding gene	Chr6:118926173-118995107 (+)
A/J	MGP_AJ_G0031134	protein coding gene	Chr6:114366689-114431316 (+)
AKR/J	MGP_AKRJ_G0031064	protein coding gene	Chr6:117421631-117485894 (+)
BALB/cJ	MGP_BALBcJ_G0031144	protein coding gene	Chr6:114172156-114237158 (+)
C3H/HeJ	MGP_C3HHeJ_G0030563	protein coding gene	Chr6:66802110-66864390 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0031603	protein coding gene	Chr6:121977544-122055017 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0028767	protein coding gene	Chr6:111368321-111432309 (+)
CAST/EiJ	MGP_CASTEiJ_G0030251	protein coding gene	Chr6:117808604-117883723 (+)
CBA/J	MGP_CBAJ_G0030830	protein coding gene	Chr6:126760501-126827775 (+)
DBA/2J	MGP_DBA2J_G0030984	protein coding gene	Chr6:113281517-113345690 (+)
FVB/NJ	MGP_FVBNJ_G0030937	protein coding gene	Chr6:112472178-112534399 (+)
LP/J	MGP_LPJ_G0031063	protein coding gene	Chr6:118936372-119004208 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0030972	protein coding gene	Chr6:130905673-130972199 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0031631	protein coding gene	Chr6:117464312-117531722 (+)
PWK/PhJ	MGP_PWKPhJ_G0029967	protein coding gene	Chr6:112299915-112366734 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0029795	protein coding gene	Chr6:116199868-116269724 (+)
WSB/EiJ	MGP_WSBEiJ_G0030335	protein coding gene	Chr6:117727953-117797004 (+)

Human Ortholog

ZFAND4, zinc finger AN1-type containing 4

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

ZFAND4, zinc finger AN1-type containing 4
Synonyms

ANUBL1
Links

HGNC:23504

NCBI Gene ID: 93550

neXtProt AC: NX_Q86XD8

UniProt: Q86XD8
Chr Location

10q11.22; chr10:45615500-45672813 (-) GRCh38

MGI Vertebrate Homology

Zfand4 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: ZFAND4
Gene Tree

Zfand4

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Phenotype Summary

4 phenotype references

All Mutations and Alleles

9
Endonuclease-mediated

2
Gene trapped

5
Targeted

2
Incidental Mutations

APF
Find Mice (IMSR)

30 strains or lines available

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All GO Annotations

1
GO References

1

Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

760
Tissues

33
cDNA Data

32
Literature Summary

3

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase zfand4

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All Sequences

86
RefSeq

31
UniProt

7
CCDS

CCDS71818.2, CCDS71819.1

Ensembl

ENSMUSG00000042213 (Evidence)
NCBI Gene

67492

			Length	Strain/Species	Flank
genomic	ENSMUSG00000042213	Ensembl Gene Model \| MGI Sequence Detail	66081	C57BL/6J	± kb
transcript	ENSMUST00000036503	Ensembl \| MGI Sequence Detail	3123	Not Applicable
polypeptide	ENSMUSP00000040057	Ensembl \| MGI Sequence Detail	739	Not Applicable

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UniProt

7 Sequences
Protein Ontology

PR:000032388 AN1-type zinc finger protein 4

(term hierarchy)
PDB

1WFF
InterPro Domains

IPR035896 AN1-like Zinc finger

IPR053061 AN1-type zinc finger domain-containing protein

IPR019956 Ubiquitin domain

IPR000626 Ubiquitin-like domain

IPR029071 Ubiquitin-like domain superfamily

IPR000058 Zinc finger, AN1-type

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All nucleic 32

cDNA 32

Microarray probesets 3

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MGI:2141627

Summaries

All 30

Developmental Gene Expression 3

Gene Ontology 1

Phenotypes 4
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130

TSS for Zfand4:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr58359	Chr6:116241147-116241186 (+)	-16 bp
Tssr58360	Chr6:116241188-116241227 (+)	25 bp
Tssr58361	Chr6:116241234-116241243 (+)	56 bp
Tssr58362	Chr6:116263513-116263543 (+)	22,345 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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