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1700039M10Rik Gene Detail
Summary
  • Symbol
    1700039M10Rik
  • Name
    RIKEN cDNA 1700039M10 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1914768
    NCBI Gene: 67518
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:57809071-57809825 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 30.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914768
 lncRNA gene Chr14:57809071-57809825 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005553
 lincRNA gene Chr14:51772628-51773372 (+)
A/J MGP_AJ_G0005538
 lincRNA gene Chr14:50739337-50740081 (+)
AKR/J MGP_AKRJ_G0005517
 lincRNA gene Chr14:52523092-52523836 (+)
BALB/cJ MGP_BALBcJ_G0005520
 lincRNA gene Chr14:50682410-50683154 (+)
C3H/HeJ MGP_C3HHeJ_G0005466
 lincRNA gene Chr14:52170538-52171282 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005676
 lincRNA gene Chr14:54323696-54324440 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005044
 lincRNA gene Chr14:48818029-48818834 (+)
CAST/EiJ MGP_CASTEiJ_G0005409
 lincRNA gene Chr14:48505161-48506104 (+)
CBA/J MGP_CBAJ_G0005456
 lincRNA gene Chr14:55938789-55939533 (+)
DBA/2J MGP_DBA2J_G0005471
 lincRNA gene Chr14:50413086-50413831 (+)
FVB/NJ MGP_FVBNJ_G0005497
 lincRNA gene Chr14:49802704-49803448 (+)
LP/J MGP_LPJ_G0005556
 lincRNA gene Chr14:52811313-52812057 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005482
 lincRNA gene Chr14:55284377-55285121 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005675
 lincRNA gene Chr14:51672999-51673743 (+)
PWK/PhJ MGP_PWKPhJ_G0005359
 lincRNA gene Chr14:46954161-46954905 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005277
 lincRNA gene Chr14:47734948-47735694 (+)
WSB/EiJ MGP_WSBEiJ_G0005459
 lincRNA gene Chr14:51985813-51986558 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 67518 NCBI Gene Model | MGI Sequence Detail 755 C57BL/6J ±  kb
transcript NR_152103 RefSeq | MGI Sequence Detail 532 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory