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Pbdc1 Gene Detail
Summary
  • Symbol
    Pbdc1
  • Name
    polysaccharide biosynthesis domain containing 1
  • Synonyms
    2610029G23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914933
    NCBI Gene: 67683
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:104123362-104160696 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 46.83 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    815 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914933
 protein coding gene ChrX:104123337-104160696 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035994
 protein coding gene ChrX:101834688-101872203 (+)
A/J MGP_AJ_G0035975
 protein coding gene ChrX:101646988-101685042 (+)
AKR/J MGP_AKRJ_G0035893
 protein coding gene ChrX:104856686-104895369 (+)
BALB/cJ MGP_BALBcJ_G0035965
 protein coding gene ChrX:100480152-100518142 (+)
C3H/HeJ MGP_C3HHeJ_G0035671
 protein coding gene ChrX:102285004-102323503 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036491
 protein coding gene ChrX:104760867-104799582 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033319
 protein coding gene ChrX:99199946-99238630 (+)
CAST/EiJ MGP_CASTEiJ_G0034957
 protein coding gene ChrX:86478326-86516457 (+)
CBA/J MGP_CBAJ_G0035646
 protein coding gene ChrX:108059896-108099733 (+)
DBA/2J MGP_DBA2J_G0035800
 protein coding gene ChrX:100942525-100979839 (+)
FVB/NJ MGP_FVBNJ_G0035741
 protein coding gene ChrX:100232021-100269900 (+)
LP/J MGP_LPJ_G0035893
 protein coding gene ChrX:102787315-102824639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035773
 protein coding gene ChrX:112727401-112765362 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036517
 protein coding gene ChrX:101491489-101528576 (+)
PWK/PhJ MGP_PWKPhJ_G0034655
 protein coding gene ChrX:84012848-84048127 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034483
 protein coding gene ChrX:87188945-87225833 (+)
WSB/EiJ MGP_WSBEiJ_G0035097
 protein coding gene ChrX:100192419-100231007 (+)



Homology
more
  • Human Ortholog
    PBDC1, polysaccharide biosynthesis domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PBDC1, polysaccharide biosynthesis domain containing 1
  • Synonyms
    CXorf26
  • Links
    NCBI Gene ID: 51260
    neXtProt AC: NX_Q9BVG4
    UniProt: Q9BVG4

  • Chr Location
    Xq13.3; chrX:76173040-76178314 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    55
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031226 Ensembl Gene Model | MGI Sequence Detail 37335 C57BL/6J ±  kb
transcript ENSMUST00000033577 Ensembl | MGI Sequence Detail 2638 Not Applicable  
polypeptide ENSMUSP00000033577 Ensembl | MGI Sequence Detail 198 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 55
    cDNA 55

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory