About   Help   FAQ
Actl11 Gene Detail
Summary
  • Symbol
    Actl11
  • Name
    actin-like 11
  • Synonyms
    4921517D21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914972
    NCBI Gene: 67722
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:107805668-107809660 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 59.07 cM, cytoband F2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    136 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914972
 protein coding gene Chr9:107805668-107809660 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035273
 protein coding gene Chr9:109843389-109847381 (+)
A/J MGP_AJ_G0035252
 protein coding gene Chr9:105832591-105836583 (+)
AKR/J MGP_AKRJ_G0035184
 protein coding gene Chr9:108473393-108477385 (+)
BALB/cJ MGP_BALBcJ_G0035246
 protein coding gene Chr9:105502472-105506464 (+)
C3H/HeJ MGP_C3HHeJ_G0034956
 protein coding gene Chr9:108871150-108875142 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035766
 protein coding gene Chr9:112816293-112820285 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032664
 protein coding gene Chr9:103265043-103269041 (+)
CAST/EiJ MGP_CASTEiJ_G0034267
 protein coding gene Chr9:108827377-108831375 (+)
CBA/J MGP_CBAJ_G0034924
 protein coding gene Chr9:116806777-116810775 (+)
DBA/2J MGP_DBA2J_G0035085
 protein coding gene Chr9:105287050-105291042 (+)
FVB/NJ MGP_FVBNJ_G0035033
 protein coding gene Chr9:104053233-104057225 (+)
LP/J MGP_LPJ_G0035161
 protein coding gene Chr9:110038779-110042771 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035072
 protein coding gene Chr9:118406923-118410915 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035787
 protein coding gene Chr9:108749716-108753708 (+)
PWK/PhJ MGP_PWKPhJ_G0033974
 protein coding gene Chr9:105608740-105612738 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033809
 protein coding gene Chr9:108813372-108817370 (+)
WSB/EiJ MGP_WSBEiJ_G0034388
 protein coding gene Chr9:108629767-108633759 (+)



Homology
more
  • Human Ortholog
    ACTL11P, actin like 11, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ACTL11P, actin like 11, pseudogene
  • Synonyms
    ACTBP13
  • Links
    NCBI Gene ID: 389120

  • Chr Location
    3p21.31; chr3:49873345-49877306 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67722 NCBI Gene Model | MGI Sequence Detail 3993 C57BL/6J ±  kb
transcript NM_026338 RefSeq | MGI Sequence Detail 3993 C57BL/6  
polypeptide NP_080614 RefSeq | MGI Sequence Detail 1207 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR004000 Actin family
    IPR043129 ATPase, nucleotide binding domain
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory