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A930005H10Rik Gene Detail
Summary
  • Symbol
    A930005H10Rik
  • Name
    RIKEN cDNA A930005H10 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915411
    NCBI Gene: 68161
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:115675227-115681779 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 50.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    299 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915411
 lncRNA gene Chr3:115675223-115681791 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015520
 unclassified non-coding RNA gene Chr3:117754274-117761618 (-)
A/J MGP_AJ_G0015497
 unclassified non-coding RNA gene Chr3:113905024-113911856 (-)
AKR/J MGP_AKRJ_G0015461
 unclassified non-coding RNA gene Chr3:116772850-116780825 (-)
BALB/cJ MGP_BALBcJ_G0015459
 unclassified non-coding RNA gene Chr3:113754190-113761031 (-)
C3H/HeJ MGP_C3HHeJ_G0015282
 unclassified non-coding RNA gene Chr3:117144640-117151534 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015913
 unclassified non-coding RNA gene Chr3:122080916-122088275 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013648
 unclassified non-coding RNA gene Chr3:109604923-109612189 (-)
CAST/EiJ MGP_CASTEiJ_G0014836
 unclassified non-coding RNA gene Chr3:116421327-116428364 (-)
CBA/J MGP_CBAJ_G0015263
 unclassified non-coding RNA gene Chr3:126250073-126258771 (-)
DBA/2J MGP_DBA2J_G0015357
 unclassified non-coding RNA gene Chr3:113143822-113150278 (-)
FVB/NJ MGP_FVBNJ_G0015364
 unclassified non-coding RNA gene Chr3:110790495-110796923 (-)
LP/J MGP_LPJ_G0015436
 unclassified non-coding RNA gene Chr3:119296339-119302860 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015388
 unclassified non-coding RNA gene Chr3:133628896-133635341 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015954
 unclassified non-coding RNA gene Chr3:116328972-116336670 (-)
PWK/PhJ MGP_PWKPhJ_G0014622
 unclassified non-coding RNA gene Chr3:112780681-112787715 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014410
 unclassified non-coding RNA gene Chr3:114339549-114346130 (-)
WSB/EiJ MGP_WSBEiJ_G0014942
 unclassified non-coding RNA gene Chr3:117007578-117014803 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving A930005H10Rik
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    17
Sequences &
Gene Models
less
  • All Sequences
    41
  • RefSeq
    3
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 68161 NCBI Gene Model | MGI Sequence Detail 6553 C57BL/6J ±  kb
transcript NR_027895 RefSeq | MGI Sequence Detail 973 C57BL/6  
polypeptide Q8CEK0 UniProt | EBI | MGI Sequence Detail 102 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 6
References
more
  • Summaries
    All 20
    Diseases 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory