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Smim14 Gene Detail
Summary
  • Symbol
    Smim14
  • Name
    small integral membrane protein 14
  • Synonyms
    1110003E01Rik, 1700127H04Rik, 5430439C17Rik, MAd4, MGC:7185
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915802
    NCBI Gene: 68552
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:65604187-65694492 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 33.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2427 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915802
 protein coding gene Chr5:65604187-65694527 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029580
 protein coding gene Chr5:65085288-65183048 (-)
A/J MGP_AJ_G0029548
 protein coding gene Chr5:62667665-62763893 (-)
AKR/J MGP_AKRJ_G0029496
 protein coding gene Chr5:64660747-64760047 (-)
BALB/cJ MGP_BALBcJ_G0029557
 protein coding gene Chr5:63357526-63449684 (-)
C3H/HeJ MGP_C3HHeJ_G0029280
 protein coding gene Chr5:65001022-65093539 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030011
 protein coding gene Chr5:67766658-67861101 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027251
 protein coding gene Chr5:58744894-58840552 (-)
CAST/EiJ MGP_CASTEiJ_G0028688
 protein coding gene Chr5:64102043-64199370 (-)
CBA/J MGP_CBAJ_G0029249
 protein coding gene Chr5:69965981-70070117 (-)
DBA/2J MGP_DBA2J_G0029395
 protein coding gene Chr5:62705218-62797277 (-)
FVB/NJ MGP_FVBNJ_G0029355
 protein coding gene Chr5:61877018-61969453 (-)
LP/J MGP_LPJ_G0029480
 protein coding gene Chr5:65594807-65693181 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029383
 protein coding gene Chr5:72845137-72948381 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030044
 protein coding gene Chr5:64330896-64424773 (-)
PWK/PhJ MGP_PWKPhJ_G0028412
 protein coding gene Chr5:61669531-61770033 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028246
 protein coding gene Chr5:63645183-63754495 (-)
WSB/EiJ MGP_WSBEiJ_G0028768
 protein coding gene Chr5:64533549-64625382 (-)



Homology
more
  • Human Ortholog
    SMIM14, small integral membrane protein 14
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMIM14, small integral membrane protein 14
  • Synonyms
    C4orf34
  • Links
    NCBI Gene ID: 201895
    neXtProt AC: NX_Q96QK8
    UniProt: Q96QK8

  • Chr Location
    4p14; chr4:39546336-39638902 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    22
  • Chemically induced (other)
    2
  • Gene trapped
    16
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Smim14
  • Incidental Mutations
    CvDC
  • Find Mice (IMSR)
    73 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    909
  • Tissues
    36
  • cDNA Data
    14
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68552 NCBI Gene Model | MGI Sequence Detail 90306 C57BL/6J ±  kb
transcript NM_001376972 RefSeq | MGI Sequence Detail 4330 C57BL/6  
polypeptide Q91VT8 UniProt | EBI | MGI Sequence Detail 99 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1915497, MGI:1918653
References
more
  • Summaries
    All 48
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 20
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory