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1110002L01Rik Gene Detail
Summary
  • Symbol
    1110002L01Rik
  • Name
    RIKEN cDNA 1110002L01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915821
    NCBI Gene: 100043040
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:3453883-3476747 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 1.79 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    517 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915821
 lncRNA gene Chr12:3453878-3477553 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003126
 antisense lncRNA gene Chr12:196548-222583 (-)
A/J MGP_AJ_G0003103
 antisense lncRNA gene Chr12:268998-294314 (-)
AKR/J MGP_AKRJ_G0003186
 antisense lncRNA gene Chr14:17485746-17489749 (+)
BALB/cJ MGP_BALBcJ_G0003090
 antisense lncRNA gene Chr12:268221-292878 (-)
C3H/HeJ MGP_C3HHeJ_G0003046
 antisense lncRNA gene Chr12:170971-195815 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003233
 antisense lncRNA gene Chr12:208632-232864 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002767
 antisense lncRNA gene Chr12:201309-232837 (-)
CAST/EiJ MGP_CASTEiJ_G0003015
 antisense lncRNA gene Chr12:228976-252460 (-)
CBA/J MGP_CBAJ_G0003043
 antisense lncRNA gene Chr12:414392-443700 (-)
DBA/2J MGP_DBA2J_G0003048
 antisense lncRNA gene Chr12:221880-247518 (-)
FVB/NJ MGP_FVBNJ_G0003068
 antisense lncRNA gene Chr12:237684-261772 (-)
LP/J MGP_LPJ_G0003123
 antisense lncRNA gene Chr12:215581-241886 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003057
 antisense lncRNA gene Chr12:246544-267762 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003237
 antisense lncRNA gene Chr12:171463-192467 (-)
PWK/PhJ MGP_PWKPhJ_G0002973
 antisense lncRNA gene Chr12:229351-253189 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002917
 antisense lncRNA gene Chr12:237325-262706 (-)
WSB/EiJ MGP_WSBEiJ_G0003046
 antisense lncRNA gene Chr12:210125-236256 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043040 NCBI Gene Model | MGI Sequence Detail 22865 C57BL/6J ±  kb
transcript NR_030694 RefSeq | MGI Sequence Detail 3300 C57BL/6  
polypeptide Q8CBQ7 UniProt | EBI | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory