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1110038B12Rik Gene Detail
Summary
  • Symbol
    1110038B12Rik
  • Name
    RIKEN cDNA 1110038B12 gene
  • Synonyms
    0610009C20Rik, 0910001G04Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916013
    NCBI Gene: 68763
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35169211-35171447 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916013
 lncRNA gene Chr17:35167235-35171498 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015351
 unclassified non-coding RNA gene Chr17:35073636-35075869 (-)
A/J MGP_AJ_G0015325
 unclassified non-coding RNA gene Chr17:33924238-33926471 (-)
AKR/J MGP_AKRJ_G0015289
 unclassified non-coding RNA gene Chr17:34387359-34389592 (-)
BALB/cJ MGP_BALBcJ_G0015289
 unclassified non-coding RNA gene Chr17:34054139-34056372 (-)
C3H/HeJ MGP_C3HHeJ_G0015113
 unclassified non-coding RNA gene Chr17:34784033-34786264 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015743
 unclassified non-coding RNA gene Chr17:36408809-36411042 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013484
 unclassified non-coding RNA gene Chr17:31691915-31693993 (-)
CAST/EiJ MGP_CASTEiJ_G0014664
 unclassified non-coding RNA gene Chr17:34780502-34782781 (-)
CBA/J MGP_CBAJ_G0015092
 unclassified non-coding RNA gene Chr17:37917370-37919602 (-)
DBA/2J MGP_DBA2J_G0015187
 unclassified non-coding RNA gene Chr17:33239278-33241511 (-)
FVB/NJ MGP_FVBNJ_G0015194
 unclassified non-coding RNA gene Chr17:33074168-33076443 (-)
LP/J MGP_LPJ_G0015267
 unclassified non-coding RNA gene Chr17:35403320-35405553 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015220
 unclassified non-coding RNA gene Chr17:36851965-36854387 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015782
 unclassified non-coding RNA gene Chr17:34611722-34613996 (-)
PWK/PhJ MGP_PWKPhJ_G0014454
 unclassified non-coding RNA gene Chr17:32073406-32075684 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014241
 unclassified non-coding RNA gene Chr17:32616002-32618281 (-)
WSB/EiJ MGP_WSBEiJ_G0014771
 unclassified non-coding RNA gene Chr17:34726212-34728486 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    70
Sequences &
Gene Models
less
  • All Sequences
    68
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 68763 NCBI Gene Model | MGI Sequence Detail 2237 C57BL/6J ±  kb
transcript NR_027943 RefSeq | MGI Sequence Detail 597 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 70
    cDNA 70

    Microarray probesets 2
Other
Accession IDs
less
MGI:1915656, MGI:1922641
References
more
  • Summaries
    All 23
    Phenotypes 11
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory