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Ubac2 Gene Detail
Summary
  • Symbol
    Ubac2
  • Name
    ubiquitin associated domain containing 2
  • Synonyms
    1190008A14Rik, Phgdhl1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916139
    NCBI Gene: 68889
  • Alliance
    gene page
  • Transcription Start Sites
    17 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:122116032-122258446 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 65.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    3927 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916139
 protein coding gene Chr14:122115970-122258447 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021664
 protein coding gene Chr14:119754718-119897015 (+)
A/J MGP_AJ_G0021624
 protein coding gene Chr14:115099012-115248874 (+)
AKR/J MGP_AKRJ_G0021600
 protein coding gene Chr14:118824621-118977019 (+)
BALB/cJ MGP_BALBcJ_G0021630
 protein coding gene Chr14:115644730-115790539 (+)
C3H/HeJ MGP_C3HHeJ_G0021408
 protein coding gene Chr14:118718220-118860971 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022070
 protein coding gene Chr14:124350379-124497128 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019608
 protein coding gene Chr14:110977842-111115953 (+)
CAST/EiJ MGP_CASTEiJ_G0020923
 protein coding gene Chr14:116628572-116780585 (+)
CBA/J MGP_CBAJ_G0021376
 protein coding gene Chr14:129080998-129237201 (+)
DBA/2J MGP_DBA2J_G0021499
 protein coding gene Chr14:114962783-115105796 (+)
FVB/NJ MGP_FVBNJ_G0021477
 protein coding gene Chr14:113313948-113458867 (+)
LP/J MGP_LPJ_G0021567
 protein coding gene Chr14:120671845-120816048 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021504
 protein coding gene Chr14:134081125-134229641 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022093
 protein coding gene Chr14:118404610-118555589 (+)
PWK/PhJ MGP_PWKPhJ_G0020667
 protein coding gene Chr14:112019491-112167971 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020505
 protein coding gene Chr14:114597165-114750778 (+)
WSB/EiJ MGP_WSBEiJ_G0020979
 protein coding gene Chr14:119092632-119237055 (+)



Homology
more
  • Human Ortholog
    UBAC2, UBA domain containing 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBAC2, UBA domain containing 2
  • Synonyms
    PHGDHL1
  • Links
    NCBI Gene ID: 337867
    neXtProt AC: NX_Q8NBM4
    UniProt: Q8NBM4

  • Chr Location
    13q32.3; chr13:99200774-99386504 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041765 Ensembl Gene Model | MGI Sequence Detail 142415 C57BL/6J ±  kb
transcript ENSMUST00000039803 Ensembl | MGI Sequence Detail 2139 Not Applicable  
polypeptide ENSMUSP00000043245 Ensembl | MGI Sequence Detail 345 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 5
Other
Accession IDs
less
MGI:2145838
References
more
  • Summaries
    All 34
    Gene Ontology 7
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:274568 Choi JH, et al., LMBR1L regulates lymphopoiesis through Wnt/beta-catenin signaling. Science. 2019 May 10;364(6440)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory