Oscp1 MGI Mouse Gene Detail - MGI:1916308 - organic solute carrier partner 1

Symbol

Oscp1
Name

organic solute carrier partner 1
Synonyms

1810007P19Rik, 6030436A01Rik

Feature Type

protein coding gene
IDs

MGI:1916308
NCBI Gene: 230751
Alliance

gene page
Transcription Start Sites

5 TSS

Sequence Map

Chr4:125952358-125985988 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 4, 59.82 cM
Mapping Data

2 experiments

SNPs within 2kb

1121 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916308	protein coding gene	Chr4:125949436-125985988 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0028769	protein coding gene	Chr4:127706135-127743104 (+)
A/J	MGP_AJ_G0028728	protein coding gene	Chr4:122675954-122708950 (+)
AKR/J	MGP_AKRJ_G0028681	protein coding gene	Chr4:126057820-126090531 (+)
BALB/cJ	MGP_BALBcJ_G0028751	protein coding gene	Chr4:123261166-123294263 (+)
C3H/HeJ	MGP_C3HHeJ_G0028465	protein coding gene	Chr4:126108981-126142826 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0029193	protein coding gene	Chr4:132584191-132621774 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026466	protein coding gene	Chr4:115831942-115865273 (+)
CAST/EiJ	MGP_CASTEiJ_G0027898	protein coding gene	Chr4:124224461-124261588 (+)
CBA/J	MGP_CBAJ_G0028431	protein coding gene	Chr4:135808520-135840909 (+)
DBA/2J	MGP_DBA2J_G0028580	protein coding gene	Chr4:123143472-123177227 (+)
FVB/NJ	MGP_FVBNJ_G0028547	protein coding gene	Chr4:121789087-121825545 (+)
LP/J	MGP_LPJ_G0028681	protein coding gene	Chr4:127994386-128030106 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0028573	protein coding gene	Chr4:140834264-140868674 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0029231	protein coding gene	Chr4:126405721-126441227 (+)
PWK/PhJ	MGP_PWKPhJ_G0027619	protein coding gene	Chr4:119603367-119638050 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0027445	protein coding gene	Chr4:122214241-122251445 (+)
WSB/EiJ	MGP_WSBEiJ_G0027978	protein coding gene	Chr4:126497080-126532769 (+)

Human Ortholog

OSCP1, organic solute carrier partner 1

Vertebrate Orthologs

4

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

OSCP1, organic solute carrier partner 1
Synonyms

C1orf102, NOR1
Links

HGNC:29971

NCBI Gene ID: 127700

neXtProt AC: NX_Q8WVF1

UniProt: Q8WVF1
Chr Location

1p34.3; chr1:36415827-36450451 (-) GRCh38

MGI Vertebrate Homology

Oscp1 stringent orthology
1 human;1 mouse;1 rat;2 zebrafish
HCOP

vertebrate homology predictions: OSCP1
Gene Tree

Oscp1

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
15 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

17
Chemically induced (other)

2
Endonuclease-mediated

2
Gene trapped

7
Radiation induced

1
Targeted

5
Genomic Mutations

4 involving Oscp1
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

38 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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All GO Annotations

8
GO References

4

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

767
Tissues

7
cDNA Data

33
Literature Summary

2

Images

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase oscp1

ZFIN oscp1a

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All Sequences

47
RefSeq

8
UniProt

3
CCDS

CCDS38879.1, CCDS89827.1

Ensembl

ENSMUSG00000042616 (Evidence)
NCBI Gene

230751

			Length	Strain/Species	Flank
genomic	ENSMUSG00000042616	Ensembl Gene Model \| MGI Sequence Detail	33631	C57BL/6J	± kb
transcript	ENSMUST00000143712	Ensembl \| MGI Sequence Detail	1473	Not Applicable
polypeptide	ENSMUSP00000152196	Ensembl \| MGI Sequence Detail	389	Not Applicable

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UniProt

3 Sequences
Protein Ontology

PR:000012056 protein OSCP1

(term hierarchy)
InterPro Domains

IPR019332 Organic solute carrier protein 1

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All nucleic 33

cDNA 33

Microarray probesets 3

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MGI:1924431

Summaries

All 40

Developmental Gene Expression 2

Gene Ontology 4

Phenotypes 15
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Oscp1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38971	Chr4:125951743-125951747 (+)	-613 bp
Tssr38972	Chr4:125952350-125952406 (+)	20 bp
Tssr38973	Chr4:125952408-125952417 (+)	55 bp
Tssr1297	Chr4:125952423-125952428 (+)	68 bp
Tssr38974	Chr4:125952444-125952453 (+)	91 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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