About   Help   FAQ
Platr10 Gene Detail
Summary
  • Symbol
    Platr10
  • Name
    pluripotency associated transcript 10
  • Synonyms
    2410007B07Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1916443
    NCBI Gene: 69193
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:75554748-75563038 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    461 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916443
 lncRNA gene Chr3:75554748-75563101 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006211
 lincRNA gene Chr3:75124035-75133610 (-)
A/J MGP_AJ_G0006203
 lincRNA gene Chr3:72793995-72803909 (-)
AKR/J MGP_AKRJ_G0006179
 lincRNA gene Chr3:74442916-74452718 (-)
BALB/cJ MGP_BALBcJ_G0006179
 lincRNA gene Chr3:72780774-72789130 (-)
C3H/HeJ MGP_C3HHeJ_G0006129
 lincRNA gene Chr3:74766609-74776407 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006342
 lincRNA gene Chr3:78093297-78102566 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005649
 lincRNA gene Chr3:68617728-68618532 (-)
CAST/EiJ MGP_CASTEiJ_G0006063
 lincRNA gene Chr3:74721262-74729321 (-)
CBA/J MGP_CBAJ_G0006114
 lincRNA gene Chr3:80581347-80589478 (-)
DBA/2J MGP_DBA2J_G0006133
 lincRNA gene Chr3:72348340-72356563 (-)
FVB/NJ MGP_FVBNJ_G0006157
 lincRNA gene Chr3:70730065-70739328 (-)
LP/J MGP_LPJ_G0006216
 lincRNA gene Chr3:76133086-76141755 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006147
 lincRNA gene Chr3:86422076-86430298 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006346
 lincRNA gene Chr3:74259686-74268780 (-)
PWK/PhJ MGP_PWKPhJ_G0006008
 lincRNA gene Chr3:72070382-72071229 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005916
 lincRNA gene Chr3:73355096-73355900 (-)
WSB/EiJ MGP_WSBEiJ_G0006110
 lincRNA gene Chr3:74539287-74547485 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    18
  • Chemically induced (other)
    1
  • Gene trapped
    16
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Platr10
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 69193 NCBI Gene Model | MGI Sequence Detail 8291 C57BL/6J ±  kb
transcript NR_040539 RefSeq | MGI Sequence Detail 1031 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Diseases 1
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory