Prss23os Gene Detail

Summary

• Symbol
  Prss23os
• Name
  serine protease 23, opposite strand
• Synonyms
  1700019G06Rik, 4930479H08Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1916654
  NCBI Gene: 108167445
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:89159215-89161081 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 49.91 cM, cytoband E1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916654	antisense lncRNA gene	Chr7:89159215-89161081 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004478	antisense lncRNA gene	Chr7:91925413-91926774 (+)
A/J	MGP_AJ_G0004458	antisense lncRNA gene	Chr7:89727935-89729296 (+)
AKR/J	MGP_AKRJ_G0004441	antisense lncRNA gene	Chr7:91803685-91805046 (+)
BALB/cJ	MGP_BALBcJ_G0004443	antisense lncRNA gene	Chr7:89372388-89373749 (+)
C3H/HeJ	MGP_C3HHeJ_G0004392	antisense lncRNA gene	Chr7:92209794-92211155 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004594	antisense lncRNA gene	Chr7:95483246-95484607 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004048	antisense lncRNA gene	Chr7:92642078-92643443 (+)
CAST/EiJ	MGP_CASTEiJ_G0004352	antisense lncRNA gene	Chr7:83643166-83644527 (+)
CBA/J	MGP_CBAJ_G0004387	antisense lncRNA gene	Chr7:98673372-98674733 (+)
DBA/2J	MGP_DBA2J_G0004401	antisense lncRNA gene	Chr7:88157968-88159329 (+)
FVB/NJ	MGP_FVBNJ_G0004418	antisense lncRNA gene	Chr7:88031128-88032489 (+)
LP/J	MGP_LPJ_G0004482	antisense lncRNA gene	Chr7:93162102-93163463 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004408	antisense lncRNA gene	Chr7:99722581-99723942 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004592	antisense lncRNA gene	Chr7:91101822-91103183 (+)
PWK/PhJ	MGP_PWKPhJ_G0004305	antisense lncRNA gene	Chr7:81171957-81173318 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004246	antisense lncRNA gene	Chr7:78426328-78427689 (+)
WSB/EiJ	MGP_WSBEiJ_G0004391	antisense lncRNA gene	Chr7:91717895-91719256 (+)

Homology

• Gene Tree
  Prss23os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Prss23os
• Find Mice (IMSR)
  3 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• UniProt
  1

• Ensembl
  ENSMUSG00000030623 (Evidence)
• NCBI Gene
  108167445

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000030623	Ensembl Gene Model | MGI Sequence Detail	1867	C57BL/6J
transcript	ENSMUST00000179361	Ensembl | MGI Sequence Detail	1362	Not Applicable
polypeptide	Q8CF39	UniProt | EBI | MGI Sequence Detail	85	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

Other
Accession IDs

MGI:1922277

References

• Summaries
  All 21

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Prss23os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67669	Chr7:89159225-89159236 (+)	16 bp
Tssr67670	Chr7:89159274-89159279 (+)	62 bp