1700023D09Rik Gene Detail

Summary

• Symbol
  1700023D09Rik
• Name
  RIKEN cDNA 1700023D09 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1916695
  NCBI Gene: 102640359
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:8732153-8734333 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916695	lncRNA gene	Chr19:8732153-8734333 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  6

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  11
• RefSeq
  2

• NCBI Gene
  102640359

Representative Sequences			Length	Strain/Species
genomic	102640359	NCBI Gene Model | MGI Sequence Detail	2181	C57BL/6J
transcript	NR_132423	RefSeq | MGI Sequence Detail	557	Not Specified

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:2147675

References

• Summaries
  All 10
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573