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Odam Gene Detail
Summary
  • Symbol
    Odam
  • Name
    odontogenic, ameloblast asssociated
  • Synonyms
    2310011G06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916842
    NCBI Gene: 69592
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:88032888-88042033 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 43.56 cM, cytoband E2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    460 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916842
 protein coding gene Chr5:88032869-88042668 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029694
 protein coding gene Chr5:88851203-88864665 (+)
A/J MGP_AJ_G0029661
 protein coding gene Chr5:85226133-85235802 (+)
AKR/J MGP_AKRJ_G0029607
 protein coding gene Chr5:88048345-88060527 (+)
BALB/cJ MGP_BALBcJ_G0029670
 protein coding gene Chr5:86147656-86158208 (+)
C3H/HeJ MGP_C3HHeJ_G0029393
 protein coding gene Chr5:88450367-88462082 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030125
 protein coding gene Chr5:92504310-92516692 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027363
 protein coding gene Chr5:80829873-80839681 (+)
CAST/EiJ MGP_CASTEiJ_G0028803
 protein coding gene Chr5:87843752-87854908 (+)
CBA/J MGP_CBAJ_G0029362
 protein coding gene Chr5:95422247-95433568 (+)
DBA/2J MGP_DBA2J_G0029507
 protein coding gene Chr5:85400306-85410113 (+)
FVB/NJ MGP_FVBNJ_G0029467
 protein coding gene Chr5:84308849-84317911 (+)
LP/J MGP_LPJ_G0029595
 protein coding gene Chr5:89265491-89275861 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029496
 protein coding gene Chr5:100511834-100530094 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030158
 protein coding gene Chr5:87612757-87625595 (+)
PWK/PhJ MGP_PWKPhJ_G0028522
 protein coding gene Chr5:84388538-84398340 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028360
 protein coding gene Chr5:87034279-87043711 (+)
WSB/EiJ MGP_WSBEiJ_G0028882
 protein coding gene Chr5:88003509-88014877 (+)



Homology
more
  • Human Ortholog
    ODAM, odontogenic, ameloblast associated
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ODAM, odontogenic, ameloblast associated
  • Synonyms
    APIN
  • Links
    NCBI Gene ID: 54959
    neXtProt AC: NX_A1E959
    UniProt: A1E959

  • Chr Location
    4q13.3; chr4:70195725-70204576 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    5
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Odam
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    17 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    31
  • GO References
    6
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000009580 Ensembl Gene Model | MGI Sequence Detail 9146 C57BL/6J ±  kb
transcript ENSMUST00000129757 Ensembl | MGI Sequence Detail 1370 Not Applicable  
polypeptide ENSMUSP00000117898 Ensembl | MGI Sequence Detail 273 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 39
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:345792 Cai H, et al., CRISPR/Cas9 model of prostate cancer identifies Kmt2c deficiency as a metastatic driver by Odam/Cabs1 gene cluster expression. Nat Commun. 2024 Mar 7;15(1):2088
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory