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Rnf113a1 Gene Detail
Summary
  • Symbol
    Rnf113a1
  • Name
    ring finger protein 113A1
  • Synonyms
    2810428C21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917192
    NCBI Gene: 69942
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:36454898-36456120 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.61 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    62 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917192
 protein coding gene ChrX:36454875-36456120 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035635
 protein coding gene ChrX:32141636-32142858 (+)
A/J MGP_AJ_G0035612
 protein coding gene ChrX:32207362-32208584 (+)
AKR/J MGP_AKRJ_G0035545
 protein coding gene ChrX:32947447-32948669 (+)
BALB/cJ MGP_BALBcJ_G0035605
 protein coding gene ChrX:31926605-31927827 (+)
C3H/HeJ MGP_C3HHeJ_G0035323
 protein coding gene ChrX:32456499-32457721 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036141
 protein coding gene ChrX:32778068-32779290 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0034613
 protein coding gene ChrX:20612046-20613268 (+)
CBA/J MGP_CBAJ_G0035292
 protein coding gene ChrX:33649983-33651205 (+)
DBA/2J MGP_DBA2J_G0035443
 protein coding gene ChrX:32021879-32023101 (+)
FVB/NJ MGP_FVBNJ_G0035390
 protein coding gene ChrX:31785233-31786455 (+)
LP/J MGP_LPJ_G0035525
 protein coding gene ChrX:32539660-32540882 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035434
 protein coding gene ChrX:34081518-34082740 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036148
 protein coding gene ChrX:32112802-32114024 (+)
PWK/PhJ MGP_PWKPhJ_G0034315
 protein coding gene ChrX:20060347-20061569 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034156
 protein coding gene ChrX:21088815-21090028 (+)
WSB/EiJ MGP_WSBEiJ_G0034749
 protein coding gene ChrX:31906554-31907776 (+)



Homology
more
  • Human Ortholog
    RNF113A, ring finger protein 113A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF113A, ring finger protein 113A
  • Synonyms
    Cwc24, RNF113, TTD5, ZNF183
  • Links
    NCBI Gene ID: 7737
    neXtProt AC: NX_O15541
    UniProt: O15541

  • Chr Location
    Xq24; chrX:119870475-119871733 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RNF113A associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    770
  • Tissues
    39
  • cDNA Data
    20
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000036537 Ensembl Gene Model | MGI Sequence Detail 1223 C57BL/6J ±  kb
    transcript ENSMUST00000046433 Ensembl | MGI Sequence Detail 1223 Not Applicable  
    polypeptide ENSMUSP00000042569 Ensembl | MGI Sequence Detail 341 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR039971 Pre-mRNA-splicing factor CWC24-like
      IPR000571 Zinc finger, CCCH-type
      IPR036855 Zinc finger, CCCH-type superfamily
      IPR013083 Zinc finger, RING/FYVE/PHD-type
      IPR001841 Zinc finger, RING-type
      IPR017907 Zinc finger, RING-type, conserved site
    Molecular
    Reagents
    less
    • All nucleic 20
      cDNA 20

      Microarray probesets 5
    References
    more
    • Summaries
      All 26
      Developmental Gene Expression 4
      Gene Ontology 2
      Phenotypes 4
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory