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Ankrd60 Gene Detail
Summary
  • Symbol
    Ankrd60
  • Name
    ankyrin repeat domain 60
  • Synonyms
    1700019A24Rik, 1700030G11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917315
    NCBI Gene: 70065
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:173410451-173420066 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 97.04 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    298 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917315
 protein coding gene Chr2:173410451-173420134 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026958
 protein coding gene Chr2:179866471-179876162 (-)
A/J MGP_AJ_G0026925
 protein coding gene Chr2:172292246-172301949 (-)
AKR/J MGP_AKRJ_G0026896
 protein coding gene Chr2:177484030-177493725 (-)
BALB/cJ MGP_BALBcJ_G0026934
 protein coding gene Chr2:172695853-172705517 (-)
C3H/HeJ MGP_C3HHeJ_G0026676
 protein coding gene Chr2:177873464-177883196 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027381
 protein coding gene Chr2:185025274-185046477 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024751
 protein coding gene Chr2:165521872-165531508 (-)
CAST/EiJ MGP_CASTEiJ_G0026134
 protein coding gene Chr2:178587379-178600740 (-)
CBA/J MGP_CBAJ_G0026653
 protein coding gene Chr2:191949722-191961285 (-)
DBA/2J MGP_DBA2J_G0026791
 protein coding gene Chr2:171383405-171393104 (-)
FVB/NJ MGP_FVBNJ_G0026757
 protein coding gene Chr2:170018351-170027980 (-)
LP/J MGP_LPJ_G0026892
 protein coding gene Chr2:179787219-179796904 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026776
 protein coding gene Chr2:194873284-194882912 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027438
 protein coding gene Chr2:177504235-177513933 (-)
PWK/PhJ MGP_PWKPhJ_G0025871
 protein coding gene Chr2:171193338-171203073 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025671
 protein coding gene Chr2:176538010-176550757 (-)
WSB/EiJ MGP_WSBEiJ_G0026207
 protein coding gene Chr2:178458416-178468104 (-)



Homology
more
  • Human Ortholog
    ANKRD60, ankyrin repeat domain 60
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD60, ankyrin repeat domain 60
  • Synonyms
    bA196N14.3, C20orf86
  • Links
    NCBI Gene ID: 140731
    neXtProt AC: NX_Q9BZ19
    UniProt: Q9BZ19

  • Chr Location
    20q13.32; chr20:58216126-58228653 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 70065 NCBI Gene Model | MGI Sequence Detail 9616 C57BL/6J ±  kb
    transcript NM_027303 RefSeq | MGI Sequence Detail 1000 C57BL/6  
    polypeptide NP_081579 RefSeq | MGI Sequence Detail 229 C57BL/6  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      4 Sequences
    • InterPro Domains
      IPR002110 Ankyrin repeat
      IPR036770 Ankyrin repeat-containing domain superfamily
      IPR039323 Ankyrin repeat domain-containing protein 60
      IPR000626 Ubiquitin-like domain
      IPR029071 Ubiquitin-like domain superfamily
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 13

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:1916675
    References
    more
    • Summaries
      All 20
      Phenotypes 5
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory