Cnrip1 MGI Mouse Gene Detail - MGI:1917505 - cannabinoid receptor interacting protein 1

Symbol

Cnrip1
Name

cannabinoid receptor interacting protein 1
Synonyms

1500041B16Rik, 3110054C06Rik, 5330437A18Rik

Feature Type

protein coding gene
IDs

MGI:1917505
NCBI Gene: 380686
Alliance

gene page
Transcription Start Sites

9 TSS

Sequence Map

Chr11:17001859-17029372 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 9.50 cM, cytoband A3.1
Mapping Data

3 experiments

SNPs within 2kb

1039 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917505	protein coding gene	Chr11:17001586-17029372 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0018055	protein coding gene	Chr11:14446218-14474271 (+)
A/J	MGP_AJ_G0018028	protein coding gene	Chr11:13952284-13977092 (+)
AKR/J	MGP_AKRJ_G0017992	protein coding gene	Chr11:14455629-14480138 (+)
BALB/cJ	MGP_BALBcJ_G0017996	protein coding gene	Chr11:14070014-14092416 (+)
C3H/HeJ	MGP_C3HHeJ_G0017809	protein coding gene	Chr11:14371859-14412298 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0018448	protein coding gene	Chr11:15052080-15083237 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016106	protein coding gene	Chr11:13128437-13156962 (+)
CAST/EiJ	MGP_CASTEiJ_G0017371	protein coding gene	Chr11:14365787-14393578 (+)
CBA/J	MGP_CBAJ_G0017784	protein coding gene	Chr11:15869853-15902697 (+)
DBA/2J	MGP_DBA2J_G0017894	protein coding gene	Chr11:13938412-13965348 (+)
FVB/NJ	MGP_FVBNJ_G0017886	protein coding gene	Chr11:13728075-13760165 (+)
LP/J	MGP_LPJ_G0017965	protein coding gene	Chr11:14611548-14635127 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0017912	protein coding gene	Chr11:16319330-16349718 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018489	protein coding gene	Chr11:14538358-14561335 (+)
PWK/PhJ	MGP_PWKPhJ_G0017151	protein coding gene	Chr11:13921077-13953077 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0016948	protein coding gene	Chr11:14290883-14324265 (+)
WSB/EiJ	MGP_WSBEiJ_G0017425	protein coding gene	Chr11:14230426-14262036 (+)

Human Ortholog

CNRIP1, cannabinoid receptor interacting protein 1

Vertebrate Orthologs

4

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

CNRIP1, cannabinoid receptor interacting protein 1
Synonyms

C2orf32, CRIP-1, CRIP1
Links

HGNC:24546

NCBI Gene ID: 25927

neXtProt AC: NX_Q96F85

UniProt: Q96F85
Chr Location

2p14; chr2:68284171-68320051 (-) GRCh38

MGI Vertebrate Homology

Cnrip1 stringent orthology
1 human;1 mouse;1 rat;2 zebrafish
HCOP

vertebrate homology predictions: CNRIP1
Gene Tree

Cnrip1

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
6 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

2
Chemically induced (other)

1
Endonuclease-mediated

1
Genomic Mutations

1 involving Cnrip1
Find Mice (IMSR)

9 strains or lines available

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All GO Annotations

15
GO References

5

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

711
Tissues

5
cDNA Data

29
Literature Summary

3

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase cnrip1

ZFIN cnrip1a, cnrip1b

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All Sequences

41
RefSeq

2
UniProt

4
CCDS

CCDS24447.1

Ensembl

ENSMUSG00000044629 (Evidence)
NCBI Gene

380686

			Length	Strain/Species	Flank
genomic	380686	NCBI Gene Model \| MGI Sequence Detail	27514	C57BL/6J	± kb
transcript	NM_029861	RefSeq \| MGI Sequence Detail	1614	C57BL/6
polypeptide	Q5M8N0	UniProt \| EBI \| MGI Sequence Detail	164	Not Applicable

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UniProt

4 Sequences
Protein Ontology

PR:000005662 CB1 cannabinoid receptor-interacting protein 1

(term hierarchy)
InterPro Domains

IPR029204 CB1 cannabinoid receptor-interacting protein 1

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All nucleic 31

cDNA 31

Microarray probesets 4

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MGI:1920478, MGI:1924314, MGI:2144321

Summaries

All 37

Developmental Gene Expression 3

Gene Ontology 5

Phenotypes 6
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Cnrip1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100443	Chr11:17001601-17001625 (+)	-246 bp
Tssr100444	Chr11:17001626-17001651 (+)	-220 bp
Tssr100445	Chr11:17001654-17001674 (+)	-195 bp
Tssr100446	Chr11:17001792-17001808 (+)	-59 bp
Tssr100447	Chr11:17001823-17001899 (+)	2 bp
Tssr100448	Chr11:17001926-17001974 (+)	91 bp
Tssr100449	Chr11:17001976-17001996 (+)	127 bp
Tssr100450	Chr11:17002144-17002151 (+)	289 bp
Tssr100451	Chr11:17004690-17004697 (+)	2,835 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24