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Mir124-2hg Gene Detail
Summary
  • Symbol
    Mir124-2hg
  • Name
    Mir124-2 host gene (non-protein coding)
  • Synonyms
    2610100L16Rik, 6430547I21Rik, A930005K07Rik, Gm2612
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917691
    NCBI Gene: 70441
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:17844085-17854235 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 4.98 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    254 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917691
 lncRNA gene Chr3:17843892-17863134 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006129
 lincRNA gene Chr3:14978516-14997449 (+)
A/J MGP_AJ_G0006120
 lincRNA gene Chr3:14901347-14920400 (+)
AKR/J MGP_AKRJ_G0006096
 lincRNA gene Chr3:14997957-15016805 (+)
BALB/cJ MGP_BALBcJ_G0006096
 lincRNA gene Chr3:14667565-14686478 (+)
C3H/HeJ MGP_C3HHeJ_G0006046
 lincRNA gene Chr3:15065380-15086241 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006257
 lincRNA gene Chr3:15959515-15980511 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005576
 lincRNA gene Chr3:13142846-13161859 (+)
CAST/EiJ MGP_CASTEiJ_G0005982
 lincRNA gene Chr3:15025404-15045297 (+)
CBA/J MGP_CBAJ_G0006031
 lincRNA gene Chr3:16248250-16268432 (+)
DBA/2J MGP_DBA2J_G0006051
 lincRNA gene Chr3:14498895-14519528 (+)
FVB/NJ MGP_FVBNJ_G0006075
 lincRNA gene Chr3:14196079-14215023 (+)
LP/J MGP_LPJ_G0006132
 lincRNA gene Chr3:15583679-15602454 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006064
 lincRNA gene Chr3:18257630-18274355 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006261
 lincRNA gene Chr3:14776554-14795430 (+)
PWK/PhJ MGP_PWKPhJ_G0005928
 lincRNA gene Chr3:14261756-14281157 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005837
 lincRNA gene Chr3:14609565-14629171 (+)
WSB/EiJ MGP_WSBEiJ_G0006030
 lincRNA gene Chr3:14839549-14860707 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    753
  • Tissues
    42
  • cDNA Data
    7
  • Literature Summary
    2
Sequences &
Gene Models
less
  • All Sequences
    45
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 70441 NCBI Gene Model | MGI Sequence Detail 10151 C57BL/6J ±  kb
transcript NR_033490 RefSeq | MGI Sequence Detail 1363 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:1924442, MGI:2139972, MGI:2444197, MGI:3780780
References
more
  • Summaries
    All 21
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory