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5730403I07Rik Gene Detail
Summary
  • Symbol
    5730403I07Rik
  • Name
    RIKEN cDNA 5730403I07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917737
    NCBI Gene: 70487
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:77273694-77306698 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 42.67 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1110 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917737
 lncRNA gene Chr9:77273694-77306700 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007462
 lincRNA gene Chr9:77795088-77832224 (-)
A/J MGP_AJ_G0007457
 lincRNA gene Chr9:75077267-75109254 (-)
AKR/J MGP_AKRJ_G0007430
 lincRNA gene Chr9:76854399-76889686 (-)
BALB/cJ MGP_BALBcJ_G0007435
 lincRNA gene Chr9:74757675-74793681 (-)
C3H/HeJ MGP_C3HHeJ_G0007379
 lincRNA gene Chr9:77365295-77399029 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007607
 lincRNA gene Chr9:79875405-79910385 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006795
 lincRNA gene Chr9:74345734-74379475 (-)
CAST/EiJ MGP_CASTEiJ_G0007283
 lincRNA gene Chr9:77715262-77753976 (-)
CBA/J MGP_CBAJ_G0007361
 lincRNA gene Chr9:82646746-82685442 (-)
DBA/2J MGP_DBA2J_G0007385
 lincRNA gene Chr9:74735103-74768442 (-)
FVB/NJ MGP_FVBNJ_G0007403
 lincRNA gene Chr9:73991557-74025463 (-)
LP/J MGP_LPJ_G0007467
 lincRNA gene Chr9:78031728-78066829 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007383
 lincRNA gene Chr9:83857720-83891037 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007610
 lincRNA gene Chr9:77042849-77076367 (-)
PWK/PhJ MGP_PWKPhJ_G0007223
 lincRNA gene Chr9:74991076-75024047 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007128
 lincRNA gene Chr9:77293098-77328856 (-)
WSB/EiJ MGP_WSBEiJ_G0007343
 lincRNA gene Chr9:76953875-76990171 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 5730403I07Rik
  • Find Mice (IMSR)
    2 strains or lines available
Mice homozygous for a null allele display reduced immunosuppressive function of myeloid-derived suppressor cells.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 70487 NCBI Gene Model | MGI Sequence Detail 33005 C57BL/6J ±  kb
transcript NR_040378 RefSeq | MGI Sequence Detail 2031 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    Genomic 1
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Phenotypes 9
  • Earliest
    J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
  • Latest
    J:329871 Wang Y, et al., Tumor Environment Promotes Lnc57Rik-Mediated Suppressive Function of Myeloid-Derived Suppressor Cells. J Immunol. 2022 Oct 1;209(7):1401-1413
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory