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Txndc16 Gene Detail
Summary
  • Symbol
    Txndc16
  • Name
    thioredoxin domain containing 16
  • Synonyms
    5730420B22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917811
    NCBI Gene: 70561
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:45371905-45457008 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 22.77 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2380 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917811
 protein coding gene Chr14:45370922-45457785 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021204
 protein coding gene Chr14:38740341-38834917 (-)
A/J MGP_AJ_G0021150
 protein coding gene Chr14:37588608-37682290 (-)
AKR/J MGP_AKRJ_G0021128
 protein coding gene Chr14:39074838-39162762 (-)
BALB/cJ MGP_BALBcJ_G0021154
 protein coding gene Chr14:37642788-37733673 (-)
C3H/HeJ MGP_C3HHeJ_G0020937
 protein coding gene Chr14:38876555-38970808 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021588
 protein coding gene Chr14:40420820-40524551 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019147
 protein coding gene Chr14:37019596-37105337 (-)
CAST/EiJ MGP_CASTEiJ_G0020462
 protein coding gene Chr14:35996909-36085136 (-)
CBA/J MGP_CBAJ_G0020903
 protein coding gene Chr14:41704852-41806908 (-)
DBA/2J MGP_DBA2J_G0021026
 protein coding gene Chr14:37517576-37604000 (-)
FVB/NJ MGP_FVBNJ_G0021010
 protein coding gene Chr14:37269765-37364392 (-)
LP/J MGP_LPJ_G0021096
 protein coding gene Chr14:39028350-39121677 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021036
 protein coding gene Chr14:41116881-41218147 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021621
 protein coding gene Chr14:38610597-38703785 (-)
PWK/PhJ MGP_PWKPhJ_G0020211
 protein coding gene Chr14:34376094-34465870 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020033
 protein coding gene Chr14:34741349-34842871 (-)
WSB/EiJ MGP_WSBEiJ_G0020518
 protein coding gene Chr14:38716296-38809865 (-)



Homology
more
  • Human Ortholog
    TXNDC16, thioredoxin domain containing 16
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TXNDC16, thioredoxin domain containing 16
  • Synonyms
    ERp90, KIAA1344
  • Links
    NCBI Gene ID: 57544
    neXtProt AC: NX_Q9P2K2
    UniProt: Q9P2K2

  • Chr Location
    14q22.1; chr14:52430596-52552522 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    52
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70561 NCBI Gene Model | MGI Sequence Detail 85104 C57BL/6J ±  kb
transcript NM_001310534 RefSeq | MGI Sequence Detail 4062 C57BL/6  
polypeptide Q7TN22 UniProt | EBI | MGI Sequence Detail 820 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 54
    cDNA 54

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145859
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory