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3830408C21Rik Gene Detail
Summary
  • Symbol
    3830408C21Rik
  • Name
    RIKEN cDNA 3830408C21 gene
Location &
Maps
more
  • Sequence Map
    Chr13:107159078-107170026 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 58.22 cM, cytoband D1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    468 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917940
 lncRNA gene Chr13:107159061-107192005 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020919
 protein coding gene Chr13:109233261-109234969 (+)
A/J MGP_AJ_G0020870
 protein coding gene Chr13:104977528-104979236 (+)
AKR/J MGP_AKRJ_G0020845
 protein coding gene Chr13:108162635-108164343 (+)
BALB/cJ MGP_BALBcJ_G0020870
 protein coding gene Chr13:105680549-105682257 (+)
C3H/HeJ MGP_C3HHeJ_G0020659
 protein coding gene Chr13:107918716-107920424 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021304
 protein coding gene Chr13:112543327-112545066 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018874
 protein coding gene Chr13:100411543-100413221 (+)
CAST/EiJ MGP_CASTEiJ_G0020178
 protein coding gene Chr13:107423743-107425431 (+)
CBA/J MGP_CBAJ_G0020621
 protein coding gene Chr13:116864139-116865847 (+)
DBA/2J MGP_DBA2J_G0020745
 protein coding gene Chr13:104737279-104738987 (+)
FVB/NJ MGP_FVBNJ_G0020727
 protein coding gene Chr13:103396227-103397935 (+)
LP/J MGP_LPJ_G0020819
 protein coding gene Chr13:109312166-109313874 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020755
 protein coding gene Chr13:117345085-117346793 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021343
 protein coding gene Chr13:107578999-107580717 (+)
PWK/PhJ MGP_PWKPhJ_G0019931
 protein coding gene Chr13:103395989-103397803 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019753
 protein coding gene Chr13:103841469-103843157 (+)
WSB/EiJ MGP_WSBEiJ_G0020236
 protein coding gene Chr13:108136902-108138610 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
  • All Sequences
    35
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100040322 NCBI Gene Model | MGI Sequence Detail 10949 C57BL/6J ±  kb
transcript NR_015471 RefSeq | MGI Sequence Detail 1898 C57BL/6  
polypeptide Q8C743 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory