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Magea9 Gene Detail
Summary
  • Symbol
    Magea9
  • Name
    MAGE family member A9
  • Synonyms
    3830417A13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917946
    NCBI Gene: 70696
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:63217154-63222384 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 34.57 cM, cytoband A5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    176 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917946
 protein coding gene ChrX:63217154-63222385 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035765
 protein coding gene ChrX:59671867-59677097 (+)
A/J MGP_AJ_G0035747
 protein coding gene ChrX:59870378-59875608 (+)
AKR/J MGP_AKRJ_G0035667
 protein coding gene ChrX:61499113-61504343 (+)
BALB/cJ MGP_BALBcJ_G0035734
 protein coding gene ChrX:59214156-59219386 (+)
C3H/HeJ MGP_C3HHeJ_G0035437
 protein coding gene ChrX:60310994-60316224 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036263
 protein coding gene ChrX:61462392-61467622 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033115
 protein coding gene ChrX:59266214-59271421 (+)
CAST/EiJ MGP_CASTEiJ_G0034729
 protein coding gene ChrX:45849214-45854439 (+)
CBA/J MGP_CBAJ_G0035411
 protein coding gene ChrX:63179752-63184982 (+)
DBA/2J MGP_DBA2J_G0035565
 protein coding gene ChrX:59454802-59460032 (+)
FVB/NJ MGP_FVBNJ_G0035515
 protein coding gene ChrX:58945877-58951195 (+)
LP/J MGP_LPJ_G0035653
 protein coding gene ChrX:60373541-60378771 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035551
 protein coding gene ChrX:64953921-64959151 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036279
 protein coding gene ChrX:59616344-59621574 (+)
PWK/PhJ MGP_PWKPhJ_G0034425
 protein coding gene ChrX:44074917-44080150 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034268
 protein coding gene ChrX:46801771-46807021 (+)
WSB/EiJ MGP_WSBEiJ_G0034872
 protein coding gene ChrX:59076185-59081415 (+)



Homology
more
  • Human Ortholog
    MAGEA1, MAGE family member A1
  • Vertebrate Orthologs
    8
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MAGEA1, MAGE family member A1
  • Synonyms
    CT1.1, MAGE1
  • Links
    NCBI Gene ID: 4100
    neXtProt AC: NX_P43355
    UniProt: P43355

  • Chr Location
    Xq28; chrX:153179284-153183880 (+)  GRCh38
  • Human Ortholog
    MAGEA10, MAGE family member A10
  • Synonyms
    CT1.10, MAGE10
  • Links
    NCBI Gene ID: 4109
    neXtProt AC: NX_P43363
    UniProt: P43363

  • Chr Location
    Xq28; chrX:152133310-152138578 (-)  GRCh38
  • Human Ortholog
    MAGEA3, MAGE family member A3
  • Synonyms
    CT1.3, HIP8, HYPD, MAGE3, MAGEA6
  • Links
    NCBI Gene ID: 4102
    neXtProt AC: NX_P43357
    UniProt: P43357

  • Chr Location
    Xq28; chrX:152698767-152702347 (+)  GRCh38
  • Human Ortholog
    MAGEA6, MAGE family member A6
  • Synonyms
    CT1.6, MAGE-3b, MAGE3B, MAGE6
  • Links
    NCBI Gene ID: 4105
    neXtProt AC: NX_P43360
    UniProt: P43360

  • Chr Location
    Xq28; chrX:152766136-152769716 (-)  GRCh38
  • Human Ortholog
    MAGEA9, MAGE family member A9
  • Synonyms
    CT1.9, MAGE9
  • Links
    NCBI Gene ID: 4108
    neXtProt AC: NX_P43362
    UniProt: P43362

  • Chr Location
    Xq28
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031179 Ensembl Gene Model | MGI Sequence Detail 5231 C57BL/6J ±  kb
transcript ENSMUST00000033522 Ensembl | MGI Sequence Detail 1649 Not Applicable  
polypeptide ENSMUSP00000033522 Ensembl | MGI Sequence Detail 303 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR002190 MAGE homology domain
    IPR041898 MAGE homology domain, winged helix WH1 motif
    IPR041899 MAGE homology domain, winged helix WH2 motif
    IPR037445 Melanoma-associated antigen
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 2
Other
Accession IDs
less
MGI:6448164
References
more
  • Summaries
    All 24
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory