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Fancd2os Gene Detail
Summary
  • Symbol
    Fancd2os
  • Name
    Fancd2 opposite strand
  • Synonyms
    4931417G12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918229
    NCBI Gene: 70979
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:113573722-113577676 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 52.80 cM, cytoband E3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    194 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918229
 protein coding gene Chr6:113573722-113577735 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031131
 protein coding gene Chr6:116133288-116137242 (-)
A/J MGP_AJ_G0031100
 protein coding gene Chr6:111675073-111679027 (-)
AKR/J MGP_AKRJ_G0031031
 protein coding gene Chr6:114675674-114679628 (-)
BALB/cJ MGP_BALBcJ_G0031111
 protein coding gene Chr6:111620667-111624621 (-)
C3H/HeJ MGP_C3HHeJ_G0030597
 protein coding gene Chr6:69621161-69625115 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031570
 protein coding gene Chr6:119126948-119130902 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028734
 protein coding gene Chr6:108700658-108704764 (-)
CAST/EiJ MGP_CASTEiJ_G0030218
 protein coding gene Chr6:115130881-115134867 (-)
CBA/J MGP_CBAJ_G0030797
 protein coding gene Chr6:123836370-123840324 (-)
DBA/2J MGP_DBA2J_G0030950
 protein coding gene Chr6:110757982-110761936 (-)
FVB/NJ MGP_FVBNJ_G0030904
 protein coding gene Chr6:109759312-109763266 (-)
LP/J MGP_LPJ_G0031030
 protein coding gene Chr6:116160701-116164655 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030938
 protein coding gene Chr6:128089783-128093737 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031597
 protein coding gene Chr6:114692461-114696415 (-)
PWK/PhJ MGP_PWKPhJ_G0029934
 protein coding gene Chr6:109710682-109714648 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029762
 protein coding gene Chr6:113499455-113503410 (-)
WSB/EiJ MGP_WSBEiJ_G0030302
 protein coding gene Chr6:115066009-115069956 (-)



Homology
more
  • Human Ortholog
    FANCD2OS, FANCD2 opposite strand
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FANCD2OS, FANCD2 opposite strand
  • Synonyms
    C3orf24
  • Links
    NCBI Gene ID: 115795
    neXtProt AC: NX_Q96PS1
    UniProt: Q96PS1

  • Chr Location
    3p25.3; chr3:10081317-10108457 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033963 Ensembl Gene Model | MGI Sequence Detail 3955 C57BL/6J ±  kb
transcript ENSMUST00000125139 Ensembl | MGI Sequence Detail 1150 Not Applicable  
polypeptide ENSMUSP00000121804 Ensembl | MGI Sequence Detail 178 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Phenotypes 10
  • Earliest
    J:56766 Takahashi Y, et al., Relaxed negative selection in germinal centers and impaired affinity maturation in bcl-xL transgenic mice. J Exp Med. 1999 Aug 2;190(3):399-410
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory