Kcnmb4os2 Gene Detail

Summary

• Symbol
  Kcnmb4os2
• Name
  potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 2
• Synonyms
  4933400F03Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1918263
  NCBI Gene: 100504412
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:116309068-116310892 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 64.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1918263	antisense lncRNA gene	Chr10:116309068-116311224 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002900	antisense lncRNA gene	Chr10:119250903-119254135 (+)
A/J	MGP_AJ_G0002877	antisense lncRNA gene	Chr10:114665107-114667263 (+)
AKR/J	MGP_AKRJ_G0002858	antisense lncRNA gene	Chr10:117986421-117988577 (+)
BALB/cJ	MGP_BALBcJ_G0002865	antisense lncRNA gene	Chr10:115066987-115069159 (+)
C3H/HeJ	MGP_C3HHeJ_G0002821	antisense lncRNA gene	Chr10:118220705-118222861 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003008	antisense lncRNA gene	Chr10:123396509-123398665 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002550	antisense lncRNA gene	Chr10:109266603-109268784 (+)
CAST/EiJ	MGP_CASTEiJ_G0002793	antisense lncRNA gene	Chr10:118499449-118502549 (+)
CBA/J	MGP_CBAJ_G0002817	antisense lncRNA gene	Chr10:128227147-128229303 (+)
DBA/2J	MGP_DBA2J_G0002824	antisense lncRNA gene	Chr10:113805361-113807517 (+)
FVB/NJ	MGP_FVBNJ_G0002843	antisense lncRNA gene	Chr10:112760864-112763020 (+)
LP/J	MGP_LPJ_G0002900	antisense lncRNA gene	Chr10:119836445-119838601 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002832	antisense lncRNA gene	Chr10:131125630-131127786 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003011	antisense lncRNA gene	Chr10:118056549-118058705 (+)
PWK/PhJ	MGP_PWKPhJ_G0002751	antisense lncRNA gene	Chr10:113891664-113894067 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002700	antisense lncRNA gene	Chr10:116864718-116866855 (+)
WSB/EiJ	MGP_WSBEiJ_G0002822	antisense lncRNA gene	Chr10:118232865-118235021 (+)

Homology

• Gene Tree
  Kcnmb4os2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Kcnmb4os2
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000085837 (Evidence)
• NCBI Gene
  100504412

Representative Sequences			Length	Strain/Species
genomic	100504412	NCBI Gene Model | MGI Sequence Detail	1825	C57BL/6J
transcript	NR_130644	RefSeq | MGI Sequence Detail	1615	C57BL/6
polypeptide	Q9CUD7	UniProt | EBI | MGI Sequence Detail	321	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 3

References

• Summaries
  All 19

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

TSS for Kcnmb4os2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95872	Chr10:116309926-116309937 (+)	864 bp