4933428P19Rik Gene Detail

Summary

• Symbol
  4933428P19Rik
• Name
  RIKEN cDNA 4933428P19 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1918479
  NCBI Gene: 71229
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:62413473-62414848 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  13 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1918479	lncRNA gene	Chr10:62413473-62414848 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002859	antisense lncRNA gene	Chr10:62018696-62020071 (+)
A/J	MGP_AJ_G0002836	antisense lncRNA gene	Chr10:60116075-60117450 (+)
AKR/J	MGP_AKRJ_G0002816	antisense lncRNA gene	Chr10:61683302-61684677 (+)
BALB/cJ	MGP_BALBcJ_G0002823	antisense lncRNA gene	Chr10:60199211-60200586 (+)
C3H/HeJ	MGP_C3HHeJ_G0002780	antisense lncRNA gene	Chr10:61604409-61605784 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002966	antisense lncRNA gene	Chr10:64232342-64233717 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002509	antisense lncRNA gene	Chr10:57085556-57086923 (+)
CAST/EiJ	MGP_CASTEiJ_G0002752	antisense lncRNA gene	Chr10:61660787-61662162 (+)
CBA/J	MGP_CBAJ_G0002775	antisense lncRNA gene	Chr10:66647573-66648948 (+)
DBA/2J	MGP_DBA2J_G0002782	antisense lncRNA gene	Chr10:59388381-59389756 (+)
FVB/NJ	MGP_FVBNJ_G0002802	antisense lncRNA gene	Chr10:58660404-58661779 (+)
LP/J	MGP_LPJ_G0002858	antisense lncRNA gene	Chr10:62401819-62403194 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002792	antisense lncRNA gene	Chr10:68865571-68866946 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002969	antisense lncRNA gene	Chr10:61527856-61529231 (+)
PWK/PhJ	MGP_PWKPhJ_G0002710	antisense lncRNA gene	Chr10:59265993-59267368 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002660	antisense lncRNA gene	Chr10:60894469-60895842 (+)
WSB/EiJ	MGP_WSBEiJ_G0002781	antisense lncRNA gene	Chr10:61462999-61464374 (+)

Homology

• Gene Tree
  4933428P19Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 4933428P19Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• UniProt
  1

• Ensembl
  ENSMUSG00000105203 (Evidence)
• NCBI Gene
  71229

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105203	Ensembl Gene Model | MGI Sequence Detail	1376	C57BL/6J
transcript	ENSMUST00000199616	Ensembl | MGI Sequence Detail	1376	Not Applicable
polypeptide	Q8CEP8	UniProt | EBI | MGI Sequence Detail	166	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573