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4933436I20Rik Gene Detail
Summary
  • Symbol
    4933436I20Rik
  • Name
    RIKEN cDNA 4933436I20 gene
  • Synonyms
    4930545H10Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918540
    NCBI Gene: 71290
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:83637271-83889365 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6576 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918540
 lncRNA gene Chr1:83637271-83889365 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004892
 lincRNA gene Chr1:84673206-84922170 (-)
A/J MGP_AJ_G0004874
 lincRNA gene Chr1:81631214-81881953 (-)
AKR/J MGP_AKRJ_G0004852
 lincRNA gene Chr1:83867004-84124846 (-)
BALB/cJ MGP_BALBcJ_G0004855
 lincRNA gene Chr1:81776145-82030485 (-)
C3H/HeJ MGP_C3HHeJ_G0004804
 lincRNA gene Chr1:84246783-84510718 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005006
 lincRNA gene Chr1:87909085-88197949 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0004796
 lincRNA gene Chr1:90732374-91010104 (-)
DBA/2J MGP_DBA2J_G0004815
 lincRNA gene Chr1:80904072-81161179 (-)
FVB/NJ MGP_FVBNJ_G0004834
 lincRNA gene Chr1:80004511-80258952 (-)
LP/J MGP_LPJ_G0004893
 lincRNA gene Chr1:85749826-86005947 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004819
 lincRNA gene Chr1:94092790-94366318 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005010
 lincRNA gene Chr1:84032180-84295166 (-)
PWK/PhJ MGP_PWKPhJ_G0004708
 lincRNA gene Chr1:80348056-80600643 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 4933436I20Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000100580 Ensembl Gene Model | MGI Sequence Detail 252095 C57BL/6J ±  kb
transcript ENSMUST00000190615 Ensembl | MGI Sequence Detail 1509 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 3
Other
Accession IDs
less
MGI:1922451
References
more
  • Summaries
    All 14
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory