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Rnf215 Gene Detail
Summary
  • Symbol
    Rnf215
  • Name
    ring finger protein 215
  • Synonyms
    0610009J22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918923
    NCBI Gene: 71673
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:4085202-4091172 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 2.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    191 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918923
 protein coding gene Chr11:4085158-4091193 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017975
 protein coding gene Chr11:1063154-1069124 (+)
A/J MGP_AJ_G0017948
 protein coding gene Chr11:1078339-1084298 (+)
AKR/J MGP_AKRJ_G0017912
 protein coding gene Chr11:1134169-1140139 (+)
BALB/cJ MGP_BALBcJ_G0017916
 protein coding gene Chr11:1046945-1052914 (+)
C3H/HeJ MGP_C3HHeJ_G0017729
 protein coding gene Chr11:1027136-1033106 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018369
 protein coding gene Chr11:1148185-1154155 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016027
 protein coding gene Chr11:955648-961810 (+)
CAST/EiJ MGP_CASTEiJ_G0017291
 protein coding gene Chr11:993545-999548 (+)
CBA/J MGP_CBAJ_G0017704
 protein coding gene Chr11:1385772-1391742 (+)
DBA/2J MGP_DBA2J_G0017815
 protein coding gene Chr11:979441-985411 (+)
FVB/NJ MGP_FVBNJ_G0017806
 protein coding gene Chr11:1014206-1020176 (+)
LP/J MGP_LPJ_G0017885
 protein coding gene Chr11:1171750-1177720 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017832
 protein coding gene Chr11:1059813-1065772 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018408
 protein coding gene Chr11:1135781-1141740 (+)
PWK/PhJ MGP_PWKPhJ_G0017072
 protein coding gene Chr11:985148-991118 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016868
 protein coding gene Chr11:1087955-1093890 (+)
WSB/EiJ MGP_WSBEiJ_G0017345
 protein coding gene Chr11:1003832-1009791 (+)



Homology
more
  • Human Ortholog
    RNF215, ring finger protein 215
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF215, ring finger protein 215
  • Links
    NCBI Gene ID: 200312
    neXtProt AC: NX_Q9Y6U7
    UniProt: Q9Y6U7

  • Chr Location
    22q12.2; chr22:30368811-30421771 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    40
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000003581 Ensembl Gene Model | MGI Sequence Detail 5971 C57BL/6J ±  kb
transcript ENSMUST00000003677 Ensembl | MGI Sequence Detail 1874 Not Applicable  
polypeptide ENSMUSP00000003677 Ensembl | MGI Sequence Detail 379 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 41
    cDNA 41

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144574, MGI:2144634
References
more
  • Summaries
    All 25
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory