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Cipc Gene Detail
Summary
  • Symbol
    Cipc
  • Name
    CLOCK interacting protein, circadian
  • Synonyms
    2310044G17Rik, mKIAA1737
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919185
    NCBI Gene: 217732
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:86993817-87012136 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 41.13 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    516 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919185
 protein coding gene Chr12:86993817-87012138 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019974
 protein coding gene Chr12:87824666-87843910 (+)
A/J MGP_AJ_G0019932
 protein coding gene Chr12:84490954-84509273 (+)
AKR/J MGP_AKRJ_G0019907
 protein coding gene Chr12:86779145-86797459 (+)
BALB/cJ MGP_BALBcJ_G0019911
 protein coding gene Chr12:84825292-84843228 (+)
C3H/HeJ MGP_C3HHeJ_G0019717
 protein coding gene Chr12:87268556-87287105 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020363
 protein coding gene Chr12:90363264-90381579 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017981
 protein coding gene Chr12:81373240-81392988 (+)
CAST/EiJ MGP_CASTEiJ_G0019267
 protein coding gene Chr12:82272570-82293358 (+)
CBA/J MGP_CBAJ_G0019689
 protein coding gene Chr12:93834238-93855579 (+)
DBA/2J MGP_DBA2J_G0019802
 protein coding gene Chr12:83980373-83998641 (+)
FVB/NJ MGP_FVBNJ_G0019789
 protein coding gene Chr12:82973920-82992241 (+)
LP/J MGP_LPJ_G0019876
 protein coding gene Chr12:87705904-87724126 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019828
 protein coding gene Chr12:96588715-96609018 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020395
 protein coding gene Chr12:86409271-86429090 (+)
PWK/PhJ MGP_PWKPhJ_G0019031
 protein coding gene Chr12:78534151-78552873 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018826
 protein coding gene Chr12:80900770-80920455 (+)
WSB/EiJ MGP_WSBEiJ_G0019320
 protein coding gene Chr12:87150054-87169684 (+)



Homology
more
  • Human Ortholog
    CIPC, CLOCK interacting pacemaker
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CIPC, CLOCK interacting pacemaker
  • Synonyms
    KIAA1737
  • Links
    NCBI Gene ID: 85457
    neXtProt AC: NX_Q9C0C6
    UniProt: Q9C0C6

  • Chr Location
    14q24.3; chr14:77098126-77117287 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    11 phenotype references
  • All Mutations and Alleles
    20
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    4
  • Gene trapped
    13
  • Targeted
    2
  • Genomic Mutations
    1 involving Cipc
  • Find Mice (IMSR)
    19 strains or lines available
Mice homozygous for a knock-out allele exhibit normal circadian rhythms and behaviors.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    128
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034157 Ensembl Gene Model | MGI Sequence Detail 18320 C57BL/6J ±  kb
transcript ENSMUST00000187814 Ensembl | MGI Sequence Detail 4098 Not Applicable  
polypeptide ENSMUSP00000141049 Ensembl | MGI Sequence Detail 432 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 128
    cDNA 128

    Microarray probesets 6
Other
Accession IDs
less
MGI:2144895, MGI:2144908
References
more
  • Summaries
    All 37
    Gene Ontology 6
    Phenotypes 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:328244 Zheng J, et al., Satellite cell-specific deletion of Cipc alleviates myopathy in mdx mice. Cell Rep. 2022 Jun 14;39(11):110939
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory