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Slc35f2 Gene Detail
Summary
  • Symbol
    Slc35f2
  • Name
    solute carrier family 35, member F2
  • Synonyms
    1500009K05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919272
    NCBI Gene: 72022
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:53678822-53725438 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 29.12 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1361 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919272
 protein coding gene Chr9:53678733-53725445 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034816
 protein coding gene Chr9:52809241-52861339 (+)
A/J MGP_AJ_G0034797
 protein coding gene Chr9:51143586-51189872 (+)
AKR/J MGP_AKRJ_G0034725
 protein coding gene Chr9:52249224-52300476 (+)
BALB/cJ MGP_BALBcJ_G0034789
 protein coding gene Chr9:50889184-50937848 (+)
C3H/HeJ MGP_C3HHeJ_G0034499
 protein coding gene Chr9:52724277-52780572 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035308
 protein coding gene Chr9:54290552-54347763 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032221
 protein coding gene Chr9:50536704-50584125 (+)
CAST/EiJ MGP_CASTEiJ_G0033821
 protein coding gene Chr9:52736254-52783938 (+)
CBA/J MGP_CBAJ_G0034470
 protein coding gene Chr9:56132047-56187981 (+)
DBA/2J MGP_DBA2J_G0034629
 protein coding gene Chr9:51011333-51057806 (+)
FVB/NJ MGP_FVBNJ_G0034571
 protein coding gene Chr9:50195262-50249589 (+)
LP/J MGP_LPJ_G0034711
 protein coding gene Chr9:53107669-53161405 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034614
 protein coding gene Chr9:57714374-57768297 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035330
 protein coding gene Chr9:52261892-52318753 (+)
PWK/PhJ MGP_PWKPhJ_G0033525
 protein coding gene Chr9:50992850-51037828 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033361
 protein coding gene Chr9:52538154-52583519 (+)
WSB/EiJ MGP_WSBEiJ_G0033933
 protein coding gene Chr9:52251448-52300896 (+)



Homology
more
  • Human Ortholog
    SLC35F2, solute carrier family 35 member F2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC35F2, solute carrier family 35 member F2
  • Synonyms
    HSNOV1
  • Links
    NCBI Gene ID: 54733
    neXtProt AC: NX_Q8IXU6
    UniProt: Q8IXU6

  • Chr Location
    11q22.3; chr11:107790991-107928293 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1050
  • Tissues
    120
  • cDNA Data
    28
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042195 Ensembl Gene Model | MGI Sequence Detail 46617 C57BL/6J ±  kb
transcript ENSMUST00000048670 Ensembl | MGI Sequence Detail 2558 Not Applicable  
polypeptide ENSMUSP00000046528 Ensembl | MGI Sequence Detail 375 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 30
    cDNA 28
    Primer pair 2

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143200
References
more
  • Summaries
    All 34
    Developmental Gene Expression 5
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:318371 Ye A, et al., PEG3 binds to H19-ICR as a transcriptional repressor. Epigenetics. 2016 Dec;11(12):889-900
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory