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Cenpn Gene Detail
Summary
  • Symbol
    Cenpn
  • Name
    centromere protein N
  • Synonyms
    2610510J17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919405
    NCBI Gene: 72155
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:117648469-117668246 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 63.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    748 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919405
 protein coding gene Chr8:117648448-117668246 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034166
 protein coding gene Chr8:120041574-120061337 (+)
A/J MGP_AJ_G0034146
 protein coding gene Chr8:115160908-115180670 (+)
AKR/J MGP_AKRJ_G0034073
 protein coding gene Chr8:118508150-118527913 (+)
BALB/cJ MGP_BALBcJ_G0034140
 protein coding gene Chr8:115357691-115377453 (+)
C3H/HeJ MGP_C3HHeJ_G0033851
 protein coding gene Chr8:119232083-119251424 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034660
 protein coding gene Chr8:124119109-124138333 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031602
 protein coding gene Chr8:108092528-108113359 (+)
CAST/EiJ MGP_CASTEiJ_G0033178
 protein coding gene Chr8:119047870-119067758 (+)
CBA/J MGP_CBAJ_G0033824
 protein coding gene Chr8:128600044-128619261 (+)
DBA/2J MGP_DBA2J_G0033980
 protein coding gene Chr8:114389006-114408768 (+)
FVB/NJ MGP_FVBNJ_G0033923
 protein coding gene Chr8:113364172-113384112 (+)
LP/J MGP_LPJ_G0034069
 protein coding gene Chr8:120173911-120193125 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033970
 protein coding gene Chr8:131194469-131214449 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034678
 protein coding gene Chr8:118602192-118621955 (+)
PWK/PhJ MGP_PWKPhJ_G0032880
 protein coding gene Chr8:114087900-114108093 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032720
 protein coding gene Chr8:117288781-117309188 (+)
WSB/EiJ MGP_WSBEiJ_G0033294
 protein coding gene Chr8:119314838-119334601 (+)



Homology
more
  • Human Ortholog
    CENPN, centromere protein N
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CENPN, centromere protein N
  • Synonyms
    BM039, C16orf60, CENP-N, ICEN32
  • Links
    NCBI Gene ID: 55839
    neXtProt AC: NX_Q96H22
    UniProt: Q96H22

  • Chr Location
    16q23.2; chr16:81006552-81033114 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    6
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    56
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031756 Ensembl Gene Model | MGI Sequence Detail 19778 C57BL/6J ±  kb
transcript ENSMUST00000034205 Ensembl | MGI Sequence Detail 1768 Not Applicable  
polypeptide ENSMUSP00000034205 Ensembl | MGI Sequence Detail 337 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 56

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142531, MGI:2142799
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:338156 Tian T, et al., Structural insights into human CCAN complex assembled onto DNA. Cell Discov. 2022 Sep 9;8(1):90
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory