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1700003M07Rik Gene Detail
Summary
  • Symbol
    1700003M07Rik
  • Name
    RIKEN cDNA 1700003M07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919475
    NCBI Gene: 72225
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:129854167-129858931 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 63.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    75 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919475
 lncRNA gene Chr4:129854167-129858931 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006519
 lincRNA gene Chr4:131938785-131942070 (+)
A/J MGP_AJ_G0006511
 lincRNA gene Chr4:126647979-126651268 (+)
AKR/J MGP_AKRJ_G0006485
 lincRNA gene Chr4:130192473-130195762 (+)
BALB/cJ MGP_BALBcJ_G0006485
 lincRNA gene Chr4:127257423-127260754 (+)
C3H/HeJ MGP_C3HHeJ_G0006435
 lincRNA gene Chr4:130251946-130255235 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006651
 lincRNA gene Chr4:136883850-136887133 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005929
 lincRNA gene Chr4:119772714-119775998 (+)
CAST/EiJ MGP_CASTEiJ_G0006367
 lincRNA gene Chr4:128439563-128442876 (+)
CBA/J MGP_CBAJ_G0006418
 lincRNA gene Chr4:140356002-140362661 (+)
DBA/2J MGP_DBA2J_G0006440
 lincRNA gene Chr4:127082931-127086220 (+)
FVB/NJ MGP_FVBNJ_G0006462
 lincRNA gene Chr4:125865853-125869427 (+)
LP/J MGP_LPJ_G0006520
 lincRNA gene Chr4:132261825-132265142 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006449
 lincRNA gene Chr4:145076348-145079625 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006655
 lincRNA gene Chr4:130560169-130563458 (+)
PWK/PhJ MGP_PWKPhJ_G0006304
 lincRNA gene Chr4:123694250-123697532 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006213
 lincRNA gene Chr4:126438471-126441732 (+)
WSB/EiJ MGP_WSBEiJ_G0006413
 lincRNA gene Chr4:130700345-130703628 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 1700003M07Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 72225 NCBI Gene Model | MGI Sequence Detail 4765 C57BL/6J ±  kb
transcript NR_040647 RefSeq | MGI Sequence Detail 2205 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 15
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:219771 Sheik Mohamed J, et al., Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells. RNA. 2010 Feb;16(2):324-37
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory