1700018A23Rik MGI Mouse Gene Detail - MGI:1919481

Sequence Map

Chr6:126799340-126802140 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1919481	lncRNA gene	Chr6:126787864-126802141 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004360	antisense lncRNA gene	Chr6:130297676-130300476 (+)
A/J	MGP_AJ_G0004337	antisense lncRNA gene	Chr6:125332470-125335273 (+)
AKR/J	MGP_AKRJ_G0004319	antisense lncRNA gene	Chr6:128729416-128732219 (+)
BALB/cJ	MGP_BALBcJ_G0004323	antisense lncRNA gene	Chr6:124908729-124911532 (+)
C3H/HeJ	MGP_C3HHeJ_G0004272	antisense lncRNA gene	Chr6:128854821-128857624 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004473	antisense lncRNA gene	Chr6:133696812-133699612 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003934	antisense lncRNA gene	Chr6:122518704-122521540 (+)
CAST/EiJ	MGP_CASTEiJ_G0004233	antisense lncRNA gene	Chr6:129054709-129057498 (+)
CBA/J	MGP_CBAJ_G0004266	antisense lncRNA gene	Chr6:138827564-138830367 (+)
DBA/2J	MGP_DBA2J_G0004281	antisense lncRNA gene	Chr6:124233957-124236760 (+)
FVB/NJ	MGP_FVBNJ_G0004298	antisense lncRNA gene	Chr6:123162002-123164805 (+)
LP/J	MGP_LPJ_G0004360	antisense lncRNA gene	Chr6:130406265-130409068 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004289	antisense lncRNA gene	Chr6:142800535-142803338 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004470	antisense lncRNA gene	Chr6:128684839-128687639 (+)
PWK/PhJ	MGP_PWKPhJ_G0004186	antisense lncRNA gene	Chr6:122496484-122499273 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004128	antisense lncRNA gene	Chr6:126758526-126761354 (+)
WSB/EiJ	MGP_WSBEiJ_G0004271	antisense lncRNA gene	Chr6:129053044-129055833 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000107368	Ensembl Gene Model \| MGI Sequence Detail	2801	C57BL/6J	± kb
	transcript	ENSMUST00000201350	Ensembl \| MGI Sequence Detail	398	Not Applicable

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MGI:5662711

Summaries

All 11
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 1700018A23Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr59009	Chr6:126798556-126798577 (+)	-773 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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