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1700018A23Rik Gene Detail
Summary
  • Symbol
    1700018A23Rik
  • Name
    RIKEN cDNA 1700018A23 gene
  • Synonyms
    Gm42574
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919481
    NCBI Gene: 72231
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:126799340-126802140 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    188 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919481
lncRNA gene Chr6:126787864-126802141 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004360
antisense lncRNA gene Chr6:130297676-130300476 (+)
A/J MGP_AJ_G0004337
antisense lncRNA gene Chr6:125332470-125335273 (+)
AKR/J MGP_AKRJ_G0004319
antisense lncRNA gene Chr6:128729416-128732219 (+)
BALB/cJ MGP_BALBcJ_G0004323
antisense lncRNA gene Chr6:124908729-124911532 (+)
C3H/HeJ MGP_C3HHeJ_G0004272
antisense lncRNA gene Chr6:128854821-128857624 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004473
antisense lncRNA gene Chr6:133696812-133699612 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003934
antisense lncRNA gene Chr6:122518704-122521540 (+)
CAST/EiJ MGP_CASTEiJ_G0004233
antisense lncRNA gene Chr6:129054709-129057498 (+)
CBA/J MGP_CBAJ_G0004266
antisense lncRNA gene Chr6:138827564-138830367 (+)
DBA/2J MGP_DBA2J_G0004281
antisense lncRNA gene Chr6:124233957-124236760 (+)
FVB/NJ MGP_FVBNJ_G0004298
antisense lncRNA gene Chr6:123162002-123164805 (+)
LP/J MGP_LPJ_G0004360
antisense lncRNA gene Chr6:130406265-130409068 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004289
antisense lncRNA gene Chr6:142800535-142803338 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004470
antisense lncRNA gene Chr6:128684839-128687639 (+)
PWK/PhJ MGP_PWKPhJ_G0004186
antisense lncRNA gene Chr6:122496484-122499273 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004128
antisense lncRNA gene Chr6:126758526-126761354 (+)
WSB/EiJ MGP_WSBEiJ_G0004271
antisense lncRNA gene Chr6:129053044-129055833 (+)



Homology
less
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107368 Ensembl Gene Model | MGI Sequence Detail 2801 C57BL/6J ±  kb
transcript ENSMUST00000201350 Ensembl | MGI Sequence Detail 398 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:5662711
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory